CNGBdb：国家基因库生命大数据平台

陈凤珍, 游丽金, 杨帆, 王丽娜, 郭学芹, 高飞, 华聪, 谈聪, 方林, 单日强, 曾文君, 王博, 王韧, 徐讯, 魏晓锋

CNGBdb: China National GeneBank DataBase

Chen Fengzhen, You Lijin, Yang Fan, Wang Lina, Guo Xueqin, Gao Fei, Hua Cong, Tan Cong, Fang Lin, Shan Riqiang, Zeng Wenjun, Wang Bo, Wang Ren, Xu Xun, Wei Xiaofeng

表2 BLAST工具数据资源

Table 2 Data resources of BLAST

数据源 数据库名称 数据库编号 数据库格式版本 CNGB The 1000 Plants Project onekp v5 Microbiome DataBase microbiome v5 Pan Immune Repertoire Database pird v5 The Transcriptomes of 1,000 Fishes Project fisht1k v5 The Bird 10,000 Genomes Project b10k v5 NCBI Nucleotide collection nt v5 Reference proteins refseq_protein v4 16S ribosomal RNA sequences 16smicrobial v4 Human genomic human_genomic v4 RefSeq Representative genomes refseq_representative_genomes v4 Non-human organisms genomic other_genomic v4 Human RefSeqGene sequences refseqgene v4 Genomic survey sequences gss v4 Reference genomic sequences refseq_genomic v4 High throughput genomic sequences htgs v4 Transcriptome Shotgun Assembly tsa v4 Expressed sequence tags est v4 Patent sequences pat v4 Sequence tagged sites sts v4 Protein Data Bank pdb v4 Metagenomic sequences env v4