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HEREDITAS ›› 2008, Vol. 30 ›› Issue (7): 919-925.doi: 10.3724/SP.J.1005.2008.00919

• 研究报告 • Previous Articles     Next Articles

Polymorphisms of mitochondrial Cyt b gene and D-loop region in sweetfish (Plecoglossus altivelis Temminck et Schlegel) from Zhejiang and Fujian Provinces

LI Na1, CHEN Shao-Bo2, XIE Qi-Lang2, LU Jian-Xin1, GUAN Min-Xin1,3   

  1. 1. Zhejiang Provincial Key Laboratory of Medical Genetic, School of Life Sciences, Wenzhou Medical College, Wenzhou 325035, China;
    2. Zhejiang Mariculture Research Institute, Wenzhou 325005, China;
    3. Division of Human Genetics and Center for Hearing and Deafness Research, Cincinnati Children’s Hospital Medical Center, Cincinnati, Ohio 45229, USA
  • Received:2008-01-17 Revised:2008-04-18 Online:2008-07-10 Published:2008-07-10
  • Contact: CHEN Shao-Bo

Abstract:

We reported here the molecular analysis of mitochondrial genomes in sweetfish (Plecoglossus altivelis). Thirty-one specimens were recruited from Ruian, Zhejiang Province, Ningde, Fujian Province, and Dongzhang reservoir, Fujian Province. DNA segments spanning cytochrome b gene and D-loop region derived from these specimens were PCR-amplified and subsequently characterized by direct DNA sequence analysis. The resultant sequence data were com-pared with the consensus sequence and further analyzed for proportion of each nucleotide. The average A, T, C, and G con-tents in Cyt b gene were 19.72%, 29.71%, 32.25%, and 18.32%, respectively, while the contents of A+T and G+C were 49.43% and 50.57%. In the D-loop region, the average A, T, C and G contents were 29.99%, 29.29%, 23.80%, and 16.92% and the contents of A+T and G+C were 59.28% and 40.72%, respectively. There was only one variant in the Cyt b gene belong to two haplotypes and the nucleotide diversity (π) was merely 0.00028. In the D-loop region, there were only 5 po-lymorphic sites belonging to 5 haplotypes and its nucleotide diversity (π) was only 0.00199. These results showed that the genetic diversity of P. altivelis from these regions was very low.