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研究报告

Mapping study of ankylosing spondylitis on HLA region in Jilin population of China

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  • 1. Institute of Geriatrics, Ministry of Health, Beijing Hospital, Beijing 100730, China;
    2. Department of Clinic Immune, the Affiliated Hospital of Beihua University, Jilin 132001, China;
    3. Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101,China

Received date: 2006-10-30

  Revised date: 2007-05-21

  Online published: 2007-07-10

Abstract

To find the susceptible genes of ankylosing spondylitis in Chinese population, we select 11 SNPs on gene HLA gene family that has strong linkage of ankylosing spondylitis in 6p21.3. By case-control study in 79 AS patients and 132 healthy subjects, the distribution of TNF-a –850 genotype TT is higher in AS group than that in normal control group (P=0.027); Mutational allele T has a significant statistically difference between AS group and normal control group (P=0.002). By linkage disequilibrium study, there are 5 SNPs present the linkage disequilibrium and the region is 15 kb, including gene LTA, TNF-a, LST1 and NCR3; In the haplotypes of the 5 SNPs , the distribution of haplotype TCTTC has statistical difference between AS group and normal control group (c2=7.406, P=0.0065), the haplotype contains mutational allele T of TNF- a -850. The result hints that there may be susceptible sites of AS in this 15 kb region, which may be TNF-a –850 C→T mutation or other sites that around the TNF-a –850.

Cite this article

WANG Ya-Wen, ZHU Xiao-Quan, SONG Yu-Guo, SUN Liang, YANG Ze . Mapping study of ankylosing spondylitis on HLA region in Jilin population of China[J]. Hereditas(Beijing), 2007 , 29(7) : 805 -812 . DOI: 10.1360/yc-007-0805

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