Advances of microarray analysis on plant gene expression under en-vironmental stresses
Received date: 2009-04-12
Revised date: 2009-05-17
Online published: 2009-12-10
Different stressed conditions impair plant growth and further, cause great loss of crop yield and even lead to lose production completely. Increasing resistance/tolerance of crops under stressed conditions is a major goal of numerous plant breeders, and many elegant works are focusing on this area to uncover these complicated mechanisms underlying it. However, the traditional strategies including physiological and biochemical methods, as well as studies on a few genes, can not well understand the overall biological mechanism. Microarray analysis opens a door to uncover these cryptic mechanisms, and has the ability of detecting gene transcription and regulation at genomic level in different plant tissues. And works in association with related methods of proteomics and metabolomics. Therefore, it is possible to locate genes in certain key metabolism pathways. Through these procedures, it is also possible to look for critical genes in the pathway and to well understand the molecular mechanism of resistance/tolerance. These results can be as a guidance for increasing the re-sistance/tolerance of stressed conditions using biotechnology methods in future. This paper mainly focused on and dis-cussed the advances of microarray analysis of stressed conditions-related genes in plants.
LIN Hai-Jian, ZHANG Zhi-Meng, CHEN E-Ou, GAO Shi-Bin, BO Guang-Tang . Advances of microarray analysis on plant gene expression under en-vironmental stresses[J]. Hereditas(Beijing), 2009 , 31(12) : 1192 -1204 . DOI: 10.3724/SP.J.1005.2009.01192
[1] Vance CP. Symbiotic nitrogen fixation and phosphorus acquisition. Plant nutrition in a world of declining renew-able resources. Plant Physiol, 2001, 127(2): 390–397.
[2] Madhava Rao KV, Raghavendra AS, Janardhan Reddy K. Physiology and Molecular Biology of Stress Tolerance in Plants. Hardcover. (Eds.). XV. Springer, 2006.
[3] Yokoi S, Bressan RA, Hasegawa PM. Salt Stress Tolerance of Plants. JIRCAS Working Report, 2002, 25–33. [4] Raghothama KG. Phosphate acquisition. Annu Rev Plant Physiol Plant Mol Biol, 1999, 550: 665–693.
[5] Beck EH, Fettig S, Knake CA, Hartig K, Bhattarai T. Spe-cific and unspecific responses of plants to cold and drought stress. J Biosci, 2007, 32(3): 501–510.
[6] Mengel K, Kirkby EA. Principles of Plant Nutrition. Bern, Switzerland:International Potash Institute. 2nd edition. 1979.
[7] Fernandes MS, Pereyra Rossiello RO. Mineral nitrogen in plant physiology and plant nutrition. Critical Rev Plant Sci, 1995, 14(2): 111–148.
[8] Mori S. Iron acquisition by plants. Curr Opin Plant Biol, 1999, 2(3): 250–253.
[9] Zhang H, Forde BG. Regulation of Arabidopsis root de-velopment by nitrate availability. J Exp Bot, 2000, 51(342): 51–59.
[10] Raghothama KG, Karthikeyan AS. Phosphate acquisition. Plant Soil, 2005, 274(1–2): 37–49.
[11] Rosolem CA, Rossetto CAV, Fernandes DM, Ishimura I. Potassium fertilization, root morphology and potassium absorption by soybean. J Plant Nutr, 1993, 16(3): 479–492.
[12] Jiang CF, Gao XH, Liao LL, Harberd NP, Fu XD. Phos-phate starvation root architecture and anthocyanin accu-mulation responses are modulated by the gibberellin-DELLA signaling pathway in Arabidopsis. Plant Physiol, 2007, 145(4): 1460–1470.
[13] Crawford NM, Glass ADM. Molecular physiological as-pects of nitrate uptake in plants. Trends Plant Sci, 1998, 3(10): 389–395.
[14] Thomine S, Lelièvre F, Debarbieux E, Schroeder JI, Hélène BB. AtNRAMP3, a multispecific vacuolar metal transporter involved in plant responses to iron deficiency. Plant J, 2003, 34(5): 685–695.
[15] Yi KK, Wu ZC, Zhou J, Du LM, Guo LB, Wu YR, Wu P. OsPTF1, a novel transcription factor involved in tolerance to phosphate starvation in rice. Plant Physiol, 2005, 138(4): 2087–2096.
[16] Remans T, Nacry P, Pervent M, Girin T, Tillard P, Lepetit M, Gojon A. A central role for the nitrate transporter NRT2.1 in the integrated morphological and physiological responses of the root system to nitrogen limitation in Arabidopsis. Plant Physiol, 2006, 140(3): 909–921.
[17] Wang R, Guegler K, LaBrie ST, Crawford NM. Genomic analysis of a nutrient response in Arabidopsis reveals di-verse expression patterns and novel metabolic and poten-tial regulatory genes induced by nitrate. Plant Cell, 2000, 12(8): 1491–1509.
[18] Wang RC, Okamoto M, Xing XJ, Crawford NM. Mi-croarray analysis of the nitrate response in Arabidopsis roots and shoots reveals over 1 000 rapidly responding genes and new linkages to glucose, trehalose-6-phosphate, iron, and sulfate metabolism. Plant Physiol, 2003, 132(2): 556–567.
[19] Williams LE, Miller AJ. Transporters responsible for the uptake and partitioning of nitrogenous solutes. Annu Rev Plant Physiol Plant Mol Biol, 2001, 52: 659–688.
[20] Scheible WR, Morcuende R, Czechowski T, Fritz C, Osuna D, Palacios-Rojas N, Schindelasch D, Thimm O, Udvardi MK, Stitt M. Genome-wide reprogramming of primary and secondary metabolism, protein synthesis, cellular growth processes, and the regulatory infrastruc-ture of Arabidopsis in response to nitrogen. Plant Physiol, 2004, 136(1): 2483–2499.
[21] Lian XM, Wang SP
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