XIE Xiao-Li, YU Ying, YUAN Zhi-Fa, YANG Jie, MA Pei-Pei, LI Di-Chao, YU Shou-Ke, AN Feng, FENG Xiao--Jing, ZHANG Yuan
. Comparative analysis on content and distribution of CpG sites in milk production traits and mastitis-related genes in dairy cattle[J]. Hereditas(Beijing), 2012
, 34(4)
: 437
-444
.
DOI: 10.3724/SP.J.1005.2012.00437
[1] Bird A. DNA methylation patterns and epigenetic memory. Genes Dev, 2002, 16(1): 6-21.
[2] Tycko B. Epigenetic gene silencing in cancer. J Clin Invest, 2000, 105(4): 40l-407.
[3] Vanselow J, Yang W, Herrmann J, Zerbe1 H, Schuberth HJ, Petzl W, Tomek W, Seyfert HM. DNA-remethylation around a STAT5-binding enhancer in the αS1-casein pro-moter is associated with abrupt shutdown of αS1-casein synthesis during acute mastitis. J Mol Endocrinol, 2006, 37(3): 463-477.
[4] Yu Y, Zhang HM, Tian F, Zhang WS, Fang HB, Song JZ. An integrated epigenetic and genetic analysis of DNA methyltransferase genes (DNMTs) in tumor resistant and susceptible chicken lines. PLoS One, 2008, 3(7): e2672.
[5] Koivula M, Mantysaari E A, Negussie E, Serenius T. Genetic and phenotypic relationships among milk yield and somatic cell count before and after clinical mastitis. J Dairy Sci, 2005, 88(5): 827-833.
[6] Schutz MM. Genetic evaluation of somatic cell scores for United States dairy cattle. J Dairy Sci, 1994, 77(7): 2113-2129.
[7] 马裴裴, 俞英, 张沅, 张勤, 王雅春, 孙东晓, 张毅. 中国荷斯坦牛SCC变化规律及其与产奶性状之间的关系. 畜牧兽医学报, 2010, 41(12): 1529-1535.
[8] Halasa T, Nielen M, De Roos APW, van Hoorne R, de Jong G, Lam TJGM, van Werven T, Hogeveen H. Production loss due to new subclinical mastitis in Dutch dairy cows estimated with a test-day model. J Dairy Sci, 2009, 92(2): 599-606.
[9] Jiang L, Liu JF, Sun DX, Ma PP, Ding XD, Yu Y, Zhang Q. Genome wide association studies for milk production traits in Chinese Holstein population. PloS One, 2010, 5(10): e13661.
[10] Ogorevc J, Kunej T, Dov? P. An integrated map of cattle candidate genes for mastitis: a step forward to new genetic markers. Acta Agric Slovenica, 2008, (Supl. 2): 85-91.
[11] Whelehan CJ, Meade KG, Eckersall PD, Young FJ, O'Far-relly C. Experimental Staphylococcus aureus in-fection of the mammary gland induces region-specific changes in innate immune gene expression. Vet Immu-nol Immunopathol, 2011, 140(3-4): 181-189.
[12] Moyes KM, Drackley JK, Morin DE, Loor JJ. Greater expression of TLR2, TLR4, and IL6 due to negative energy balance is associated with lower expression of HLA-DRA and HLA-A in bovine blood neutrophils after intramam-mary mastitis challenge with Streptococcus uberis. Funct Integr Genomics, 2010, 10(1): 53-61.
[13] He YH, Chu Q, Ma PP, Wang YC, Zhang Q, Sun DX, Zhang Y, Yu Y, Zhang Y. Association of bovine CD4 and STAT5b single nucleotide polymorphisms with somatic cell scores and milk production traits in Chinese Holsteins. J Dairy Res, 2011, 78(2): 242-249.
[14] Pryce JE, Bolormaa S, Chamberlain AJ, Bowman PJ, Savin K, Goddard ME, Hayes BJ. A validated genome-wide association study in 2 dairy cattle breeds for milk production and fertility traits using variable length haplotypes. J Dairy Sci, 2010, 93(7): 3331-3345.
[15] Gardiner-Garden M, Frommer M. CpG islands in verte-brate genomes. J Mol Biol, 1987, 196(2): 261-282.
[16] Yamada Y, Watanabe H, Miura F, Soejima H, Uchiyama M, Iwasaka T, Mukai T, Sakaki Y, Ito T. A comprehensive analysis of allelic methylation status of CpG islands on human chromosome 21q. Genome Res, 2004, 14(2): 247-266.
[17] 凡时财, 邹见效, 徐红兵, 张学工. 人类基因组CpG岛甲基化概况的预测. 科学通报, 2010, 55(14): 1329-1334.
[18] Pälmke N, Santacruz D, Walter J. Comprehensive analysis of DNA-methylation in mammalian tissues using MeDIP-chip. Methods, 2011, 53(2): 175-184.
[19] Irizarry RA, Ladd-Acosta C, Wen B, Wu Z, Montano C, Onyango P, Cui H, Gabo K, Rongione M, Webster M, Ji H, Potash JB, Sabunciyan S, Feinberg AP. The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores. Nat Genet, 2009, 41(2): 178-186.
[20] Li QH, Li N, Hu XX, Li JX, Du Z, Chen L, Yin GL, Duan JJ, Zhang HC, Zhao YF, Wang
