Plants are constantly challenged by various stresses at all phases of development, and epigenetic modifications play a crucial role in the adaptive evolution to the changing environment. Recent studies have shown that genomic hypermethylation and locus-specific DNA demethylation induced by cold, salinity and other stimuli would inhibit the dele-terious gene mutations and increase the expression of stress responsive genes. The mutants of histone acetyltransferase (GCN5) and histone deacetylase (HDA6 and HDA19) genes displayed hypersensitivity to ABA and salinity stresses. Histone acetylation and methylation exert a cumulative or synergistic effect on the expression of stress-responsive genes. The inter-actions between H2A.Z-containing nucleosomes and DNAs mediate the thermosensory responses in Arabidopsis. Further-more, there are reports that drought, high temperature and salinity stress responses can be modulate by chromatin remodel-ing complexes SWI/SNF. In this review, we summarized previously published researches on the epigenetic regulation of plant stress response.
[1] A rnholdt-Schmitt B. Stress-induced cell reprogramming. A role for global genome regulation? Plant Physiol, 2004, 136(1): 2579-2586.
[2] Doroszuk A, Wojewodzic MW, Kammenga JE. Rapid adaptive divergence of life-history traits in response to abiotic stress within a natural population of a parthenogenetic nematode. Proc Biol Sci, 2006, 273(1601): 2611-2618.
[3] Chinnusamy V, Zhu JK. Epigenetic regulation of stress responses in plants. Curr Opin Plant Biol, 2009, 12(2): 133-139.
[4] Meyer P. DNA methylation systems and targets in plants. FEBS Lett, 2011, 585(13): 2008-2015.
[5] Vanyushin BF, Ashapkin VV. DNA methylation in higher plants: past, present and future. Biochim Biophys Acta, 2011, 1809(8): 360-368.
[6] Law JA, Jacobsen SE. Establishing, maintaining and modifying DNA methylation patterns in plants and animals. Nat Rev Genet, 2010, 11(3): 204-220.
[7] Gilbert DM, Wallrath LL. Chromatin and chromosomes. Mol Biol Cell, 2011, 22(6): 717.
[8] Angers B, Castonguay E, Massicotte R. Environmentally induced phenotypes and DNA methylation: how to deal with unpredictable conditions until the next generation and after. Mol Ecol, 2010, 19(7): 1283-1295.
[9] Milutinovic S, Zhuang QL, Niveleau A, Szyf M. Epigenomic stress response. Knockdown of DNA methyltrans-ferase 1 triggers an intra-S-phase arrest of DNA replication and induction of stress response genes. J Biol Chem, 2003, 278(17): 14985-14995.
[10] Cao XF, Jacobsen SE. Role of the Arabidopsis DRM methyltransferases in de novo DNA methylation and gene silencing. Curr Biol, 2002, 12(13): 1138-1144.
[11] Cao XF, Aufsatz W, Zilberman D, Mette MF, Huang MS, Matzke M, Jacobsen SE. Role of the DRM and CMT3 methyltransferases in RNA-directed DNA methylation. Curr Biol, 2003, 13(24): 2212-2217.
[12] Bartee L, Malagnac F, Bender J. Arabidopsis cmt3 chromomethylase mutations block non-CG methylation and silencing of an endogenous gene. Genes Dev, 2001, 15(14): 1753-1758.
[13] Melamed-Bessudo C, Levy AA. Deficiency in DNA methylation increases meiotic crossover rates in euchromatic but not in heterochromatic regions in Arabidopsis. Proc Natl Acad Sci USA, 2012, 109(16): E981-E988.
[14] Boyko A, Kathiria P, Zemp FJ, Yao YL, Pogribny I, Kovalchuk I. Transgenerational changes in the genome stability and methylation in pathogen-infected plants: (virus-induced plant genome instability). Nucleic Acids Res, 2007, 35(5): 1714-1725.
[15] Boyko A, Blevins T, Yao YL, Golubov A, Bilichak A, Ilnytskyy Y, Hollunder J, Meins F Jr, Kovalchuk I. Trans-generational adaptation of Arabidopsis to stress requires DNA methylation and the function of Dicer-like proteins. PLoS One, 2010, 5(3): e9514.
[16] Boyko A, Kovalchuk I. Genetic and epigenetic effects of plant-pathogen interactions: an evolutionary perspective. Mol Plant, 2011, 4(6): 1014-1023.
[17] Labra M, Grassi F, Imazio S, Di Fabio T, Citterio S, Sgorbati S, Agradi E. Genetic and DNA-methylation changes induced by potassium dichromate in Brassica napus L. Chemosphere, 2004, 54(8): 1049-1058.
[18] Steward N, Ito M, Yamaguchi Y, Koizumi N, Sano H. Periodic DNA methylation in maize nucleosomes and demethylation by environmental stress. J Biol Chem, 2002, 277(40): 37741-37746.
[19] Choi CS, Sano H. Abiotic-stress induces demethylation and transcriptional activation of a gene encoding a glyc-erophosphodiesterase-like protein in tobacco plants. Mol Genet Genomics, 2007, 277(5): 589-600.
[20] Jiang N, Bao ZR, Zhang XY, Hirochika H, Eddy SR, McCouch SR, Wessler SR. An active DNA transposon family in rice. Nature, 2003, 421(6919): 163-167.
[21] Boyko A, Kovalchuk I. Epigenetic control of plant stress response. Environ Mol Mutagen, 2008, 49(1): 61-72.
[22] Kim JM, To TK, Nishioka T, Seki M. Chromatin regulation functions in plant abiotic stress responses. Plant Cell Environ, 2010, 33(4): 604-611.
[23] Pandey R, Muller A, Napoli CA, Selinger DA, Pikaard CS, Richards EJ, Bende