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Hereditas(Beijing) >

2019 , Vol. 41 >Issue 11: 1060 - 1066

DOI: https://doi.org/10.16288/j.yczz.19-277

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Development and application of the plant phenomics analysis platform

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  • 1. State Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Innovative Academy of Seed Design, Chinese Academy of Sciences, Chinese Academy of Sciences, Beijing 100101, China
    2. Crop Phenomics Joint Research Center, Wuhan 430074, China

Received date: 2019-09-10

  Revised date: 2019-10-15

  Online published: 2019-10-29

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Abstract

With the completion of the whole genome sequencing of major important crops, researchers have an increasing demand for high-throughput, accurate and nondestructive phenotyping technologies. The Plant Phenomics Analysis Platform (PPAP) was established in 2017 at the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences. The platform has the most up-to-date comprehensive phenotyping analysis facility in China with a full spectrum of imaging systems consisting of eight units including visible light, infrared, near-infrared, root near-infrared, fluorescence, chlorophyll fluorescence, high spectral and lidar imaging. The platform has also specifically established phenotyping technologies for complex traits, such as root phenotype collection and analysis, spike and spikelet feature collection and analysis and responses under stress conditions. PPAP is dedicated to providing all-possible services for domestic and international academic communities and industrial partners engaged in plant sciences.

Key words： plants; phenotype; high-throughput and non-destructive technology; application and services

Cite this article

Weijuan Hu, Hong-Qing Ling, Xiangdong Fu . Development and application of the plant phenomics analysis platform[J]. Hereditas(Beijing), 2019 , 41(11) : 1060 -1066 . DOI: 10.16288/j.yczz.19-277

References

[1] Johannsen W . The genotype conception of heredity. Int J Epidemiol, 2014,43(4):129-159.
[2] Davis BD . The isolation of biochemically deficient mutants of bacteria by means of penicillin. Proc Natl Acad Sci USA, 1949,35(1):1-10.
[3] Mahner M, Kary M . What exactly are genomes, genotypes and phenotypes? And what about phenomes? J Theor Biol, 1997,186(1):55-63.
[4] Freimer N, Sabatti C . The human phenome project. Nat Genet, 2003,34(1):15-21.
[5] El-Hendawy S, Al-Suhaibani N, Dewir YH, Elsayed S, Alotaibi M, Hassan W, Refay Y, Tahir MU . Ability of modified spectral reflectance indices for estimating growth and photosynthetic efficiency of wheat under saline field conditions. Agronomy, 2019,9(1):35.
[6] Xu T, Su CL, Hu D, Li FF, Lu QQ, Zhang TT, Xu QS . Molecular distribution and toxicity assessment of praseodymium by Spirodela polyrrhiza. J Hazard Mater, 2016,312:132-140.
[7] Subedi P, Walsh K, Purdy P. Determination of optimum maturity stages of mangoes using fruit spectral signatures. In: Ⅸ International Mango Symposium, 2013,992:521-527.
[8] Zhou W, Sui ZH, Wang JG, Hu YY, Kang KH, Hong HR, Niaz Z, Wei HH, Du QW, Peng C, Mi P, Que Z . Effects of sodium bicarbonate concentration on growth, photosynthesis, and carbonic anhydrase activity of macroalgae Gracilariopsis lemaneiformis, Gracilaria vermiculophylla, and Gracilaria chouae(Gracilariales, Rhodophyta). Photosynth Res, 2016,128(3):259-270.
[9] Schreiber U. Pulse-Amplitude-Modulation(PAM) fluorometry and saturation pulse method: an overview. In: Christos Papageorgiou G, Govindjee, eds. Chlorophyll a Fluorescence: A Signature of Photosynthesis. Kluwer Academic Publishers, Dordrecht, the Netherlands, 2004, 279-319.
[10] Ribaut JM, de Vicente MC, Delannay X . Molecular breeding in developing countries: challenges and perspectives. Curr Opin Plant Biol, 2010,13(2):213-218.
[11] Tester M, Langridge P . Breeding technologies to increase crop production in a changing world. Science, 2010,327(5967):818-822.
[12] Finkel E . With 'phenomics,' plant scientists hope to shift breeding into overdrive. Science, 2009,325(5939):380-381.
[13] Awada L, Phillips PWB, Smyth SJ . The adoption of automated phenotyping by plant breeders. Euphytica, 2018,214(8):148.
[14] Mir RR, Reynolds M, Pinto F, Khan MA, Bhat MA . High-throughput phenotyping for crop improvement in the genomics era. Plant Sci, 2019,282:60-72.
[15] Zhou J, Francois T, Tony P, John D, Daniel R, Neil H, Simon G, Cheng T, Zhu Y, Wang XE, Jiang D, Ding YF .
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