猪5个群体SLA微卫星遗传多样性

doi:10.3724/SP.J.1005.2012.01427

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HEREDITAS ›› 2012, Vol. 34 ›› Issue (11): 1427-1433.doi: 10.3724/SP.J.1005.2012.01427

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Genetic diversity based on swine leukocyte antigen complex mi-crosatellites(SLA-MS) in five pig populations

YU Hui ¹, LIU Rong-Hui^1,4, LI Hua¹, ZUO Qi-Zhen¹, LI Yan², WU Zhen-Fang³

1. Department of Animal Science, Foshan University, Nanhai 528231, China 2. Dongguan Institute of Animal Science, Dongguan 511700, China 3. College of Animal Science and Technology of South China Agricultural University, Guangzhou 510642, China 4. The Kai Xian Bureau of Husbandry and Veterinary, Chongqing 405400, China

Received:2012-08-23 Revised:2012-10-21 Online:2012-11-20 Published:2012-11-25

Abstract

Abstract: The genetic diversity of swine leukocyte antigen complex (SLA) was studied among Guangdong local pigs, Huanan wild boars (S.s. chirodontus) and introduced pigs, which aimed at providing a theoretical foundation for further pig anti-disease resistance breeding. Pietrain pigs, Duroc pigs, Large black-white pigs, Lantang pigs, and Huanan wild boars were genotyped by employing 18 microsatellites in swine leukocyte antigen complex (SLA-MS). The result showed that the average diversity in SLA II was higher (He=0.628, PIC=0.581) than that in SLA I (He=0.530, PIC=0.474) and in SLA III (He=0.526, PIC=0.458). The molecular diversity indices (MDI) of Huanan wild boars was the highest(0.716), followed by Lantang pigs (0.614), Large black-white pigs (0.559), Pietrain pigs (0.550) and Duroc pigs (0.507). As a whole, the genetic diversity of Huanan wild boars was the highest over Guangdong native pigs and introduced pigs. Large black-white pigs and Duroc pigs had ever happened a severe bottleneck by comparison with the Garza-Williamson index (GWI) in Huanan wild boar. From the genetic distance, one clade was that Lantang pigs were first clustered with Huanan wild boar, and then grouped together with Large black-white pigs; another clade was that Pietrain pigs were independently clustered with Duroc pigs in the NJ tree. The results would establish the foundation for pig conservation of germplasm resource, disease resistance breeding, and multiplicative strains.

Key words: swine leukocyte antigen complex (SLA), microsatellites, genetic diversity

YU Hui LIU Rong-Hui LI Hua ZUO Qi-Zhen LI Yan WU Zhen-Fang. Genetic diversity based on swine leukocyte antigen complex mi-crosatellites(SLA-MS) in five pig populations[J]. HEREDITAS, 2012, 34(11): 1427-1433.

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Genetic diversity based on swine leukocyte antigen complex mi-crosatellites(SLA-MS) in five pig populations

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