应用生物信息学寻找山羊新的microRNA分子及其实验验证
1. 上海交通大学医学遗传研究所, 上海 200040;
2. 卫生部医学胚胎分子生物学重点实验室, 上海市胚胎与生殖工程重点实验室, 上海 200040
收稿日期: 2008-03-02
修回日期: 2008-04-02
网络出版日期: 2008-10-10
Computational and experimental identification of novel microRNAs in goat
Received date: 2008-03-02
Revised date: 2008-04-02
Online published: 2008-10-10
陈海漩,严忠海,龙健儿,颜景斌,黄英 . 应用生物信息学寻找山羊新的microRNA分子及其实验验证[J]. 遗传, 2008 , 30(10) : 1326 -1332 . DOI: 10.3724/SP.J.1005.2008.01326
Abstract: microRNA (miRNA) is a class of non-coding small RNA molecules with roughly 22 nucleotides in length, regu-lating gene expression on post-transcriptional level and playing an important role in cell proliferation, differentiation and apoptosis process. Based on the conservation of miRNAs sequence, we compared the known miRNAs among five mam-mals, i.e., human, mouse, cattle, pig and dog with the sequence of sheep genome that is highly homologous to goat genome, published on the NCBI, and 11 candidate miRNAs were eventually obtained. RT-PCR analysis showed the expression of the 11 miRNAs in brain and 5 in liver, indicating that they might be novel miRNAs. The methodology provides an alternative approach to the exploration of new miRNAs in goat.
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