为了探讨巴马小型猪启动子U6和7SK的功能以及为生产GGTA1基因沉默的广西巴马小型猪奠定基础, 文章克隆并分析了siRNA启动子U6和7SK, 并分别连接pMD18-shEGFP载体, 分别与PEGFP-N1共转猪肾细胞, 进行RNAi实验。以pMD18-hU6-shEGFP为阳性对照, 无启动子的pMD18-shEGFP载体为阴性对照, 单独转染PEGFP-N1为第一组空白对照, 以ddH2O替代质粒为第二组空白对照组, 验证这两种启动子在猪细胞中的功能。结果表明:广西巴马小型猪RNA聚合酶III型siRNA启动子U6和7SK的序列全长分别为553 bp和437 bp。成功构建了pMD18-pU6-shEGFP和pMD18-p7SK-shEGFP干扰载体, 转染猪源PK-15细胞, 证明U6以及7SK两个启动子具有较高的siRNA表达活性, 可以用于α-1,3半乳糖转移酶等猪源基因的沉默实验。
To investigate the functions of U6 and 7SK of Bama mini-pig and produce Bama mini-pig with silenced GGTA1 gene, the siRNA promoters U6 and 7SK were cloned, ligated into pMD18-shEGFP, and co-transfected with PEGFP- N1 into PK-15 kidney cells of pigs to be used in RNAi experiments. The functions of the two promoters in pig cells were verified using pMD18-hU6-shEGFP as the positive control, pMD18-shEGFP vector without promoter as the negative control, PEGFP-N1 as the first blank control, ddH2O in replacement of the plasmid as the second blank control. The results showed that the lengths of U6 and 7SK in Bama mini-pig were 553 bp and 437 bp, respectively. Vectors pMD18-pU6- shEGFP and pMD18-p7SK-shEGFP were constructed and transfected into PK-15 cells from pigs. Promoters pU6 and p7SK proved to express high levels of siRNA activity and can be used in the experiment of silencing α-1,3galactosyltransferase gene.
[1] Fire A, Xu SQ, Montgomery MK, Kostas SA, Driver S, EMello CC. Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans. Nature, 1998, 391(6669): 806-811.
[2] 信吉阁, 王晓洪, 韩佃刚, 牛自兵, 李月涛, 曾养志. RNA干扰技术的应用研究进展. 动物医学进展, 2006, 27(2): 30-33.
[3] Tijsterman M, Plasterk RH. Dicers at RISC; the mecha-nism of RNAi. Cell, 2004, 117(1): 1-3.
[4] Elbashir SM, Harborth J, Lendeckel W, Yalcin A, Weber K, Tuschl T. Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells. Nature, 2001, 411(6836): 494-498.
[5] Yang D, Buchholz F, Huang ZD, Goga A, Chen CY, Brodsky FM, Bishop JM. Short RNA duplexes produced by hydrolysis with Escherichia coli RNase III mediate effective RNA interference in mammalian cells. Proc Natl Acad Sci USA, 2002, 99(15): 9942-9947.
[6] Hamada M, Ohtsuka T, Kawaida R, Koizumi M, Morita K, Furukawa H, Imanishi T, Miyagishi M, Taira K. Effects on RNA interference in gene expression (RNAi) in cul-tured mammalian cells of mismatches and the introduction of chemical modifications at the 3'-ends of siRNAs. Antisense Nucleic Acid Drug Dev, 2002, 12(5): 301-309.
[7] 张中华, 侯永泰. siRNA制备技术的研究进展. 生命科学, 2004, 16(4): 231-235, 199.
[8] Nie LH, Das Thakur M, Wang YM, Su Q, Zhao YL, Feng YF. Regulation of U6 promoter activity by transcriptional interference in viral vector-based RNAi. Genomics Proteomics Bioinformatics, 2010, 8(3): 170-179.
[9] Cummins D, Doran TJ, Tyack S, Purcell D, Hammond J. Identification and characterisation of the porcine 7SK RNA polymerase III promoter for short hairpin RNA ex-pression. J RNAi Gene Silencing, 2008, 4(1): 289-294.
[10] Michels AA, Fraldi A, Li QT, Adamson TE, Bonnet F, van Nguyen T, Sedore SC, Price JP, Price DH, Lania L, Ben-saude O. Binding of the 7SK snRNA turns the HEXIM1 protein into a P-TEFb (CDK9/cyclin T) inhibitor. EMBO J, 2004, 23(13): 2608-2619.
[11] Schramm L, Hernandez N. Recruitment of RNA poly-merase III to its target promoters. Gen Dev, 2002, 16(20): 2593-2620.
[12] Hernandez N. Small nuclear RNA genes: a model system to study fundamental mechanisms of transcription. J Biol Chem, 2001, 276(29): 26733-26736.
[13] Krüger W, Benecke BJ. Structural and functional analysis of a human 7SK RNA gene. J Mol Biol, 1987, 195(1): 31-41.
[14] Moon IS, Krause MO. Common RNA polymerase I, II, and III upstream elements in mouse 7SK gene locus revealed by the inverse polymerase chain reaction. DNA Cell Biol, 1991, 10(1): 23-32.
[15] Lambeth LS, Wise TG, Moore RJ, Muralitharan MS, Doran TJ. Comparison of bovine RNA polymerase III promoters for short hairpin RNA expression. Anim Genet, 2006, 37(4): 369-372.
[16] Lambeth LS, Moore RJ, Muralitharan M, Dalrymple BP, McWilliam S, Doran TJ. Characterisation and application of a bovine U6 promoter for expression of short hairpin RNAs. BMC Biotechnol, 2005, 5: 13.
[17] Bannister SC, Wise TG, Cahill DM, Doran TJ. Compari-son of chicken 7SK and U6 RNA polymerase III promot-ers for short hairpin RNA expression. BMC Biotech-nol, 2007, 7: 79.
[18] 王永娟, 沈鹏鹏, 张鑫宇, 夏晓莉, 孙怀昌. 禽U6启动子的克隆、序列分析及其驱动的siRNA表达. 中国农业科学, 2009, 42(8): 3003-3008.
[19] Chuang CK, Lee KH, Fan CT, Su YS. Porcine type III RNA polymerase III promoters for short hairpin RNA expression. Anim Biotechnol, 2009, 20(1): 34-39.
[20] Cummins D, Doran TJ, Tyack S, Purcell D, Hammond J. Identification and characterisation of the porcine 7SK RNA polymerase III promoter for short hairpin RNA expression. J RNAi Gene Silencing, 2008, 4(1): 289-294.
[21] Sago N, Omi K, Tamura Y, Kunugi H, Toyo-Oka T, To-kunaga K, Hohjoh H. RNAi induction and activation in mammalian muscle cells where Dicer and eIF2C translaion initiation factors are barely ex-pressed. Biochem Biophys Res Commun, 2004, 319(