研究报告

棉花“三桃”性状的QTL定位

展开
  • 1. 河南师范大学生命科学学院, 新乡 453007 2. 河南科技学院, 河南省高等学校作物分子育种重点学科开放实验室/棉花研究所, 新乡 453003

收稿日期: 2011-12-23

  修回日期: 2012-03-20

  网络出版日期: 2012-06-25

基金资助

国家农业科技成果转化资金项目(编号:2010276), 国家棉花现代产业技术体系项目(编号:nycytx-06-09), 河南省重点科技攻关计划项目(编号:092102110025; 112102110105)资助

QTL mapping for “pre-summer boll, summer boll and autumn boll” traits in cotton

Expand
  • 1. College of Life Sciences, Henan Normal University, Xinxiang 453007, China 2. Henan Institute of Science and Technology, Key Discipline Open Lab on Crop Molecular Breeding of Henan Institute of higher Learning, Cotton Research Institute, Xinxiang 453003, China

Received date: 2011-12-23

  Revised date: 2012-03-20

  Online published: 2012-06-25

摘要

棉花的“三桃”(伏前桃、伏桃和秋桃)一直以来被认为是棉花早熟高产的重要指标。文章以早熟高产棉百棉2号为核心亲本, 分别与中晚熟材料TM-1和中棉所12杂交, 获得两个组合的F2和F2:3家系群体。对两个组合进行了遗传连锁图谱构建, 标记位点分别为269个和127个, 图谱总长分别为1 837.8 cM和1 244.3 cM。两组合共检测到29个“三桃”性状QTL, 包括16个可能性QTL和13个显著性QTL, 其中, 5个显著性QTL的LOD值既大于3又大于permutation阈值; 16个QTL的贡献率大于10%, 解释表型变异的10.9%~44.5%。在两组合的相同染色体共同标记附近检测到4个共同QTL, 分别为伏前桃 qPSB-17、伏桃 qSB-17(qSB-17a/17b)和秋桃 qAB-17、qAB-12/26, 可用于棉花“三桃”性状的标记辅助选择; 其中, 伏桃 qSB-17(qSB-17a/17b)在两个组合中的贡献率均大于10%, 秋桃 qAB-17、qAB-12/26在一个组合中的贡献率均大于10%, 这些既共同又贡献率较大的QTL在标记辅助选择中应优先考虑。

本文引用格式

王晓芸,李成奇,夏哲,董娜,王清连 . 棉花“三桃”性状的QTL定位[J]. 遗传, 2012 , 34(6) : 757 -764 . DOI: 10.3724/SP.J.1005.2012.00757

Abstract

“Pre-summer boll, summer boll and autumn boll” have long been regarded as an important index for prematurity and high-yield in cotton. In this study, the prematurity and high-yield cotton cultivar, Baimian 2, was used as the central parent to cross separately with the middle-late-matury lines TM-1 and CIR12, and then two populations of F2 and F2:3 family lines were obtained, which was used to construct two genetic linkage maps. These maps were comprised of 269 and 127 marker loci with the total length 1837.8 cM and 1244.3 cM, respectively. Results of QTL location showed that a total of 29 QTLs were detected in the two combinations, including 16 suggestive QTLs and 13 significant QTLs, of which 5 significant QTLs had higher LOD values that was not only greater than 3 but also greater than the threshold calculated by permutation test. The contribution rate of 16 QTLs explained 10.9%-44.5% of the phenotypic variations. Four common QTLs, qPSB-17 for pre-summer boll, qSB-17 (qSB-17a/17b) for summer boll, and qAB-17 and qAB-12/26 for autumn boll, were detected close to common markers of the same chromosome in the two combinations, which could be applied in marker-assisted selection. Moreover, the contribution rate of qSB-17 (qSB-17a/17b) for summer boll in the two combinations was greater than 10%, and that of qAB-17, qAB-12/26 for autumn boll in one combination were greater than 10%. These common QTLs with greater contribution rates should take into consideration firstly in marker-assisted selection.

参考文献

[1] 喻树迅, 宋美珍, 范术丽. 我国短季棉遗传育种研究进展. 棉花学报, 2007, 19(5): 331-336.
[2] 吴征彬. 棉花区域试验的田间试验技术. 湖北农业科学, 2003, (2): 37-40.
[3] 李蔚, 南策雄, 吴家全, 孙伟, 王菁, 周桃英. 秋桃在提高鄂东棉区棉花产量中的重要作用. 中国棉花, 2001, 28(2): 9-10.
[4] 曾斌. 三个陆地棉杂交种的产量杂种优势表现及其生理基础[学位论文]. 南京: 南京农业大学, 2008.
[5] 范术丽, 喻树迅, 宋美珍, 原日红. 短季棉早熟性的分子标记及QTL定位. 棉花学报, 2006, 18(3): 135-139.
[6] Guo YF, McCarty JC, Jenkins J, Saha SK. QTL for node first fruiting branch in cross of an upland cotton, Gos-sypium hirsutum L., cultivar with primitive accession Texas 701. Euphytica, 2008, 163: 113-122.
[7] 张先亮, 高俊山, 宋国立, 刘方, 黎绍惠, 刘克锋, 楚宗艳, 邵玉英, 王坤波. 陆地棉中G6主要性状主 效和上位性QTL分析. 分子植物育种, 2009, 7(2): 312-320.
[8] 秦永生, 刘任重, 梅鸿献, 张天真, 郭旺珍. 陆地棉产量相关性状的QTL定位. 作物学报, 2009, 35 (10): 1812-1821.
[9] Qin HD, Guo WZ, Zhang YM, Zhang TZ. QTL mapping of yield and fiber traits based on a four- way cross population in Gossypium hirsutum L. Theor Appl Genet, 2008, 117(6): 883- 894.
[10] 艾尼江. 陆地棉早熟性的遗传与QTL定位[学位论文]. 南京: 南京农业大学, 2010.
[11] 朱高岭, 王春虎, 郭秀华, 高卫楷, 甘洋洋. 百棉2号生育特性的初步研究. 河南农业科学, 2008, (4): 47-50.
[12] 谭联望, 刘正德. 中棉所12的选育及其种性研究. 中国农业科学, 1990, 3(3): 12-19.
[13] Paterson AH, Brubaker CL, Wendel JF. A rapid method for extraction of cotton (Gossypium spp.) genomic DNA suitable for RFLP or PCR analysis. Plant Mol Biol Rep, 1993, 11(2): 112-127.
[14] Guo WZ, Cai CP, Wang CB, Han ZG, Song XL, Wang K, Niu XW, Cheng W, Lu KY, Shi B, Zhang TZ. A microsa-tellite-based, gene-rich linkage map reveals genome structure, function and evolution in Gossypium. Genetics, 2007, 176(1): 527-541.
[15] Nguyen TB, Giband M, Brottier P, Risterucci AM, Lacape JM. Wide coverage of the tetraploid cotton genome using newly developed microsatellite markers. Theor Appl Genet, 2004, 109(1): 167-175.
[16] Zhang TZ, Yuan YL, Yu J, Guo WZ, Kohel RJ. Molecular tagging of a major QTL for fiber strength in upland cotton and its marker-assisted selection. Theor Appl Genet, 2003, 106: 262-268.
[17] Mei M, Syed NH, Gao W, Thaxton PM, Smith CW, Stelly DM, Chen ZJ. Genetic mapping and QTL analysis of fiber-related traits in cotton (Gossypium). Theor Appl Genet, 2004, 108 (2): 280-291.
[18] 李成奇, 郭旺珍, 马晓玲, 张天真. 陆地棉衣分差异群体产量及产量构成因素的QTL标记和定位. 棉花 学报, 2008 , 20(3): 163-169.
[19] Jiang F, Zhao J, Zhou L, Guo WZ, Zhang TZ. Molecular mapping of Verticillium wilt resistance QTL clus-tered on chromosomes D7 and D9 in upland cotton. Sci China C: Life Sci, 2009, 52(9): 872-884.
[20] Zhang J, Guo W, Zhang T. Molecular linkage map of al-lotetraploid cotton (Gossypium hirsutum L. ×Gossypium barbadense L.) with a haploid population. Theor Appl Genet, 2002, 105(8): 1166-1174.
[21] Van Ooijen JW, Voorrips RE. JoinMap R Version 3.0: software for the calculation of genetic linkage maps. CPRO-DLO, Wageningen, 2001.
[22] Basten CJ, Weir BS, Zeng ZB. QTL cartographer, Version1.15. Department of Statistics, North Carolina State University, Raleigh, 2001.
[23] Zeng ZB. Precision mapping of quantitative trait loci. Genetics, 1994, 136(4): 1457-1468.
[24] Lander ES, Kruglyak L. Genetic dissection of complex traits: guidelines for interpreting and reporting linkage results. Nat Genet, 1995, 11(3): 241-247.
[25] Jiang CX, Wright RJ, EI-Zik KM, Paterson AH. Polyploid formation created unique avenues for response to selection in Gossypium (cotton). Proc Natl Acad Sci USA, 1998, 95 (8): 4419-4424.
[26] Paterson AH, Saranga Y, Menz M, Jiang CX, Wright RJ. QTL analysis of genotype × environment interactions af-fecting cotton fiber quality. Theor Appl Genet, 2003, 106(3): 384-396.
[27] Mccouch SR, Cho YG, Yano M, Paul E, Blinstrub M, Morishima H, Kinoshita T. Report on QTL nomenclature. Rice Genet Newslett, 1997, 14: 112-113.
[28] 王芙蓉, 刘任重, 王留明, 张传云, 刘国栋, 刘勤红, 马小波, 张军. 陆地棉品种抗黄萎病性状的分子 标记及其辅助选择效果. 棉花
文章导航

/