植物基因组编辑检测方法
收稿日期: 2018-03-29
修回日期: 2018-08-18
网络出版日期: 2018-09-06
Detection methods of genome editing in plants
Received date: 2018-03-29
Revised date: 2018-08-18
Online published: 2018-09-06
刘春霞, 耿立召, 许建平 . 植物基因组编辑检测方法[J]. 遗传, 2018 , 40(12) : 1075 -1091 . DOI: 10.16288/j.yczz.18-079
The life science has entered a new chapter with the revolutionary implementation of the CRISPR/Cas9 genome editing technology in various living organisms. With the unique flexibility, feasibility and extendibility, the CRISPR/Cas9 technology greatly accelerates genetic engineering research, as well as plant molecular breeding. However, it has become a challenge to screen for and identify genome-edited plants at early stages in a rapid and high-throughput fashion, due to the massive number of plants produced from transformation process. In this review, we summarize the molecular methods developed in recent years to identify genome-edited plants. We compare their advantages and disadvantages, and the scope of application. In addition, we provide insights of the development trend of detection methods for plant genome editing. This review will serve as a reference for future genome editing research in plants.
| [1] | Li JF, Norville JE, Aach J , McCormack M,Zhang D, Bush J, Church GM, Sheen J. Multiplex and homologous recombination-mediated genome editing in Arabidopsis and Nicotiana benthamiana using guide RNA and Cas9. Nat Biotechnol, 2013,31(8):688-691. | |||
| [2] | Feng Z, Zhang B, Ding W, Liu X, Yang DL, Wei P, Cao F, Zhu S, Zhang F, Mao Y, Zhu JK . Efficient genome editing in plants using a CRISPR/Cas system. Cell Res, 2013,23(10):1229-1232. | |||
| [3] | Lozano-Juste J, Cutler SR . Plant genome engineering in full bloom. Trends Plant Sci, 2014,19(5):284-287. | |||
| [4] | Jiang W, Zhou H, Bi H, Fromm M, Yang B, Weeks DP . Demonstration of CRISPR/Cas9/sgRNA-mediated targeted gene modification in Arabidopsis, tobacco, sorghum and rice. Nucleic Acids Res, 2013,41(20):e188. | |||
| [5] | Upadhyay SK, Kumar J, Alok A, Tuli R . RNA-guided genome editing for target gene mutations in wheat. G3 (Bethesda), 2013,3(12):2233-2238. | |||
| [6] | Liang Z, Zhang K, Chen K, Gao C . Targeted mutagenesis in Zea mays using TALENs and the CRISPR/Cas9 system. J Genet Genom, 2014,41(2):63-68. | |||
| [7] | Jia H, Wang N . Targeted genome editing of sweet orange using Cas9/sgRNA. PLoS One, 2014,9(4):e93806. | |||
| [8] | Gao W, Long L, Tian X, Xu F, Liu J, Singh PK, Botella JR, Song C . Genome editing in cotton with the CRISPR/Cas9 system. Front Plant Sci, 2017,8:1364. | |||
| [9] | Fan D, Liu T, Li C, Jiao B, Li S, Hou Y, Luo K . Efficient CRISPR/Cas9-mediated targeted mutagenesis in populus in the first generation. Sci Rep, 2015,5:12217. | |||
| [10] | Puchta H . The repair of double-strand breaks in plants: mechanisms and consequences for genome evolution. J Exp Bot, 2005,56(409):1-14. | |||
| [11] | Sugano SS, Shirakawa M, Takagi J, Matsuda Y, Shimada T, Hara-Nishimura I, Kohchi T . CRISPR/ Cas9-mediated targeted mutagenesis in the liverwort Marchantia polymorpha L. Plant Cell Physiol, 2014,55(3):475-481. | |||
| [12] | Yan L, Wei S, Wu Y, Hu R, Li H, Yang W, Xie Q . High-efficiency genome editing in Arabidopsis using YAO promoter-driven CRISPR/Cas9 system. Mol Plant, 2015,8(12):1820-1823. | |||
| [13] | Mikami M, Toki S, Endo M . Comparison of CRISPR/ Cas9 expression constructs for efficient targeted mutagenesis in rice. Plant Mol Biol, 2015,88(6):561-572. | |||
| [14] | Lloyd A, Plaisier CL, Carroll D, Drews GN . Targeted mutagenesis using zinc-finger nucleases in Arabidopsis . Proc Natl Acad Sci USA, 2005,102(6):2232-2237. | |||
| [15] | Zhang F, Maeder ML, Unger-Wallace E, Hoshaw JP, Reyon D, Christian M, Li X, Pierick CJ, Dobbs D, Peterson T, Joung JK, Voytas DF .
/
|