小鼠生长激素受体基因环状转录本的克隆及其表达规律
收稿日期: 2021-04-27
修回日期: 2021-07-21
网络出版日期: 2021-08-19
基金资助
国家自然科学基金项目编号(31672412);国家自然科学基金项目编号(31972550);广东省自然科学基金项目编号(2020A1515011576);粤桂联合基金资助编号(2020B1515420008)
Cloning and expression of circular transcript of mouse growth hormone receptor gene
Received date: 2021-04-27
Revised date: 2021-07-21
Online published: 2021-08-19
Supported by
Supported by the National Natural Science Foundation of China Nos(31672412);Supported by the National Natural Science Foundation of China Nos(31972550);the Natural Science Foundation of Guangdong Province No(2020A1515011576);Guangdong-Guangxi Joint Fund No(2020B1515420008)
根据文献报道并通过circBase数据库查找,发现小鼠生长激素受体基因(growth hormone receptor, GHR)存在8个环状转录本。为确定GHR基因环状转录本(circGHR)的真实存在,探究其表达规律,本研究以昆明小鼠(Mus musculus)为研究对象,通过PCR扩增和测序检测circGHR的真实存在,并筛选出一个circGHR作为目标分子,通过RNase R处理和反转录证实了circGHR的环形结构,利用qRT-PCR分析circGHR和GHR mRNA的时空表达规律。结果表明:小鼠circGHR全长为820 nt,由GHR基因外显子2~8环化形成。RNase R耐受性分析表明,小鼠circGHR具备环形分子的一般特征,不易被RNase R降解。与oligo-d(T)18引物相比,随机引物对circGHR具有较高的反转录效率,进一步说明circGHR是一个不含poly(A)的环状结构分子。组织表达谱结果表明,circGHR在1周龄和7周龄小鼠肝脏和肾脏高表达,在胸肌和腿肌中低表达;circGHR在肝脏和胸肌组织的时序表达谱结果表明circGHR表达无显著差异;circGHR在腿肌组织的时序表达谱结果表明,circGHR在小鼠5周龄之前为低表达,在7周龄以后表现为高表达。本研究结果证实了小鼠GHR基因存在一个环状转录本circGHR,并初步揭示了circGHR的表达规律,为后期深入开展小鼠circGHR的生物学功能及其在小鼠生长发育过程中的作用机制奠定基础。
张为露, 冷奇颖, 郑嘉辉, AliHassanNawaz, 焦振海, 王府建, 张丽 . 小鼠生长激素受体基因环状转录本的克隆及其表达规律[J]. 遗传, 2021 , 43(9) : 890 -900 . DOI: 10.16288/j.yczz.21-156
Based on reports in the literature and search results on the circBase database, 8 circular transcripts of the mouse growth hormone receptor (GHR) gene were identified. In order to confirm the existence of the circular transcripts of the GHR gene (circGHRs) and to explore their expression patterns, the Kunming mouse (Mus musculus) was used as a research animal. This study detected the existence of circGHRs by RT-PCR amplification and sequencing, one of which was selected as circGHR for detailed analysis. The circular structure of circGHR was confirmed by RNase R treatment and reverse transcription. The spatiotemporal expression of circGHR and GHR mRNA was analyzed by qRT-PCR. The results showed that the full length of mouse circGHR was 820 nt, which was formed by circularization of exons 2-8 of the transcript of the GHR gene. RNase R tolerance analysis shows that mouse circGHR has the general characteristics of circular molecules and is not easily degraded by RNase R. Compared with oligo-d(T)18 primers, random primers have higher reverse transcription efficiency for circGHR, which further shows that circGHR is a poly(A)-free cyclic structure molecule. Tissue expression profile results show that circGHR is highly expressed in the liver and kidney of 1 week-old and 7-week old Kunming mice, but is low in pectoral muscles and leg muscles. The time-series expression profile of circGHR does not show any significant difference between the liver and pectoral muscle tissue. The circGHR expression in the leg muscle was low before 5 weeks of age but increased after 7 weeks of age. This study confirmed the existence of a circular transcript circGHR of the mouse GHR gene, and initially revealed the expression pattern of circGHR. The results of the study laid a foundation for in-depth developmental studies on the biological functions of the mouse circGHR and its mechanism of action regarding the growth and development of mice.
Key words: mouse; growth hormone receptor; circular RNA
| [1] | Palmiter RD, Norstedt G, Gelinas RE, Hammer RE, Brinster RL. Metallothionein-human GH fusion genes stimulate growth of mice. Science, 1983, 222(4625):809-814. |
| [2] | Chen DB, Li QH, Li LH, Tao JG, Chai Y, Wen SP, Wang JH, Liu L, Jia JJ. Growth hormone and growth hormone receptor gene expression. Chin Anim Husb Vet Med, 2007, 34(11):52-54. |
| [2] | 陈宝定, 李琦华, 李丽红, 陶金光, 柴艳, 文生萍, 王金浩, 刘丽, 贾俊静. 生长激素与生长激素受体基因的表达. 中国畜牧兽医, 2007, 34(11):52-54. |
| [3] | Ma X, Hu Y, Xiong G, He XR, Wang XQ. Overview of growth hormone receptor gene and growth hormone receptor. J Hunan Agric Univ (Nat Sci), 2010, 36(S1):58-62. |
| [3] | 马晓, 胡毅, 熊钢, 何湘蓉, 王晓清. 生长激素受体及其基因研究进展. 湖南农业大学学报(自然科学版), 2010, 36(S1):58-62. |
| [4] | Argetsinger LS, Carter-Su C. Mechanism of signaling by growth hormone receptor. Physiol Rev, 1996, 76(4):1089-1107. |
| [5] | Luo J, Wang XL, Sun ZC, Wu D, Zhang W, Wang ZJ. Progress in circular RNAs of plants. Hereditas(Beijing), 2018, 40(6):467-477. |
| [5] | 骆甲, 王型力, 孙志超, 吴迪, 张玮, 王正加. 植物环状RNA研究进展. 遗传, 2018, 40(6):467-477. |
| [6] | Sanger HL, Klotz G, Riesner D, Gross HJ, Kleinschmidt AK. Viroids are single-stranded covalently closed circular RNA molecules existing as highly base-paired rod-like structures. Proc Natl Acad Sci USA, 1976, 73(11):3852-3856. |
| [7] | Jeck WR, Sorrentino JA, Wang K, Slevin MK, Burd CE, Liu JZ, Marzluff WF, Sharpless NE. Circular RNAs are abundant, conserved, and associated with ALU repeats. RNA, 2013, 19(2):141-157. |
| [8] | Suzuki H, Zuo YH, Wang JH, Zhang MQ, Malhotra A, Mayeda A. Characterization of RNase R-digested cellular RNA source that consists of lariat and circular RNAs from pre-mRNA splicing. Nucleic Acids Res, 2006, 34(8):e63. |
| [9] | Suzuki H, Tsukahara T. A view of pre-mRNA splicing from RNase R resistant RNAs. Int J Mol Sci, 2014, 15(6):9331-9342. |
| [10] | Chen L, Shan G. Circular RNAs remain peculiarly unclear in biogenesis and function. Sci China Life Sci, 2015, 58(6):616-618. |
| [11] | Chen L, Huang C, Wang XL, Shan G. Circular RNAs in eukaryotic cells. Curr Genomics, 2015, 16(5):312-318. |
| [12] | Huang C, Shan G. What happens at or after transcription: Insights into circRNA biogenesis and function. Transcription, 2015, 6(4):61-64. |
| [13] | Liu XQ, Gao YB, Zhao LZ, Cai YC, Wang HY, Miao M, Zhang HX. Biogenesis, research methods, and functions of circular RNAs. Hereditas(Beijing), 2019, 41(6):469-485. |
| [13] | 刘旭庆, 高宇帮, 赵良真, 蔡宇晨, 王汇源, 苗苗, 顾连峰, 张航晓. 环状RNA的产生、研究方法及功能. 遗传, 2019, 41(6):469-485. |
| [14] | Li ZY, Huang C, Bao C, Chen L, Lin M, Wang XL, Zhong GL, Yu B, Hu WC, Dai LM, Zhu PF, Chang ZX, Wu QF, Zhao Y, Jia Y, Xu P, Liu HJ, Shan G. Exon-intron circular RNAs regulate transcription in the nucleus. Nat Struct Mol Biol, 2015, 22(3):256-264. |
| [15] | Legnini I, Di Timoteo G, Rossi F, Morlando M, Briganti F, Sthandier O, Fatica A, Santini T, Andronache A, Wade M, Laneve P, Rajewsky N, Bozzoni I. Circ-ZNF609 is a circular RNA that can be translated and functions in myogenesis. Mol Cell, 2017, 66(1): 22-37.e9. |
| [16] | Zheng X, Chen LJ, Zhou Y, Wang Q, Zheng ZJ, Xu B, Wu C, Zhou Q, Hu WW, Wu CP, Jiang JT. A novel protein encoded by a circular RNA circPPP1R12A promotes tumor pathogenesis and metastasis of colon cancer via Hippo-YAP signaling. Mol Cancer, 2019, 18(1):47. |
| [17] | Dong R, Ma XK, Chen LL, Yang L. Increased complexity of circRNA expression during species evolution. RNA Biol, 2017, 14(8):1064-1074. |
| [18] | Zhen SL, Li L, Zhang HP. Progress on translation ability of circular RNA. Hereditas(Beijing), 2020, 42(5):423-434. |
| [18] | 郑帅龙, 李利, 张红平. 环状RNA翻译能力研究进展. 遗传, 2020, 42(5):423-434. |
| [19] | Vincent HA, Deutscher MP. Substrate recognition and catalysis by the exoribonuclease RNase R. J Biol Chem, 2006, 281(40):29769-29775. |
| [20] | Rybak-Wolf A, Stottmeister C, Glažar P, Jens M, Pino N, Giusti S, Hanan M, Behm M, Bartok O, Ashwal-Fluss R, Herzog M, Schreyer L, Papavasileiou P, Ivanov A, Öhman M, Refojo D, Kadener S, Rajewsky N. Circular RNAs in the mammalian brain are highly abundant, conserved, and dynamically expressed. Mol Cell, 2015, 58(5):870-885. |
| [21] | Beyea JA, Sawicki G, Olson DM, List E, Kopchick JJ, Harvey S. Growth hormone (GH) receptor knockout mice reveal actions of GH in lung development. Proteomics, 2006, 6(1):341-348. |
| [22] | Beyea JA, Olson DM, Vandergriend RA, Harvey S. Expression of growth hormone and its receptor in the lungs of embryonic chicks. Cell Tissue Res, 2005, 322(3):379-392. |
| [23] | Landau D, Domene H, Flyvbjerg A, Grønbaek H, Roberts CT, Argov S, LeRoith D. Differential expression of renal growth hormone receptor and its binding protein in experimental diabetes mellitus. Growth Horm IGF Res, 1998, 8(1):39-45. |
| [24] | Giani JF, Miquet JG, Muñoz MC, Burghi V, Toblli JE, Masternak MM, Kopchick JJ, Bartke A, Turyn D, Dominici FP. Upregulation of the angiotensin-converting enzyme 2/angiotensin-(1-7)/Mas receptor axis in the heart and the kidney of growth hormone receptor knock-out mice. Growth Horm IGF Res, 2012, 22(6):224-233. |
| [25] | Wei XF, Wang DM, Liu S, Zhou P. Signal peptide and its application in protein expression. Biotechnol Bull, 2006, (6):38-42. |
| [25] | 韦雪芳, 王冬梅, 刘思, 周鹏. 信号肽及其在蛋白质表达中的应用. 生物技术通报, 2006, (6):38-42. |
| [26] | Zhou B, Yang H, Yang C, Bao YL, Yang SM, Liu J, Xiao YF. Translation of noncoding RNAs and cancer. Cancer Lett, 2021, 497:89-99. |
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