Hereditas(Beijing) ›› 2026, Vol. 48 ›› Issue (1): 87-101.doi: 10.16288/j.yczz.25-080
• Research Article • Previous Articles Next Articles
Kaiyue Song1,2(
), Yifei Zhang1,2(
), Yao Zhang2, Shuting Long2, Jianjun Peng2, Yuandong Sun2, Xiaojuan Cui2, Benshan Pan2, Yuxin Chai2, Xiaoxia Wang2, Jiahui Chen2
Received:2025-03-24
Revised:2025-05-07
Online:2026-01-20
Published:2025-05-30
Contact:
Yifei Zhang
E-mail:2628211150@qq.com;zhangyf@hnust.edu.cn
Supported by:Kaiyue Song, Yifei Zhang, Yao Zhang, Shuting Long, Jianjun Peng, Yuandong Sun, Xiaojuan Cui, Benshan Pan, Yuxin Chai, Xiaoxia Wang, Jiahui Chen. pnr cooperate with fred to regulate SOP cell fate both positively and negatively in the medial notum of Drosophila[J]. Hereditas(Beijing), 2026, 48(1): 87-101.
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Table 1
Up-regulated genes in fred-RNAi microarray analysis"
| 基因/别名 | 平均对照信号 | 平均实验信号 | 差异倍数 | 功能/同源性 |
|---|---|---|---|---|
| 转录因子 (6种) | ||||
| Sox100B | 124 | 412 | 3.3 | HMG-box |
| cabut | 201 | 574 | 2.8 | Zinc finger, C2H2 |
| CG6272 | 164 | 413 | 2.5 | bZIP |
| CG18358 | 145 | 353 | 2.4 | LIM domain |
| CG10916 | 291 | 1,541 | 5.3 | Zinc ion binding |
| Arc1 | 117 | 2,642 | 22.6 | Zn-finger CCHC type |
| 酶 (30种) | ||||
| CG18522 | 31 | 670 | 21.0 | Aldehyde oxidase |
| CG3074 | 19.5 | 368 | 18.9 | Endopeptidase |
| CG18547 | 139 | 3,165 | 5.8 | NAD(P)-linked oxidoreductase |
| Nos | 13 | 239 | 17.7 | Nitric-oxide synthase |
| CG2064 | 60 | 645 | 10.8 | Oxidoreductase |
| CG18493 | 41 | 330 | 8.1 | Serine-type peptidase |
| CG3734 | 200 | 1,570 | 7.8 | Serine-type peptidase |
| CG32549 | 139 | 1,041 | 7.5 | 5′-nucleotidase |
| GstE1 | 570 | 3,684 | 6.5 | Glutathione transferase |
| GstE5 | 163 | 930 | 5.7 | Glutathione transferase |
| GstE6 | 70 | 3,051 | 43.6 | Glutathione transferase |
| amd | 130 | 691 | 5.3 | Dopamine metabolism |
| CG1582 | 178 | 692 | 3.9 | Helicase |
| CG12224 | 245 | 852 | 3.5 | Oxidoreductase |
| CG10638 | 1,406 | 4,835 | 3.4 | Aldehyde reductase |
| CG5955 | 140 | 462 | 3.2 | UDP-glucose 4-epimerase |
| CG3008 | 282 | 905 | 3.2 | Protein kinase |
| CG6330 | 104 | 325 | 3.1 | Uridine phosphorylase |
| kraken | 192 | 563 | 2.9 | Serine hydrolase |
| GstD3 | 1,356 | 3,966 | 2.9 | Glutathione transferase |
| CG4210 | 289 | 818 | 2.8 | Protein acetylation |
| Aldh | 445 | 1,238 | 2.8 | Aldehyde dehydrogenase |
| CG31549 | 526 | 1,434 | 2.7 | Oxidoreductase |
| mre11 | 457 | 1,223 | 2.7 | Exonuclease |
| AcCoAS | 116 | 307 | 2.6 | Acetate-CoA ligase |
| Ugt302C1 | 232 | 602 | 2.6 | Glucuronosyltransferase |
| Ugt302K1 | 23 | 429 | 18.5 | UDP-glucosyl transferase |
| MRP | 620 | 1,610 | 2.6 | Xenobiotic-transporting ATPase |
| l(2)03659 | 141 | 362 | 2.6 | ATPase |
| escl | 599 | 1,671 | 2.8 | Histone methyltransferase |
| 结构蛋白 (4种) | ||||
| Tsp42Ed | 19 | 523 | 27.7 | Tetraspanin |
| Ndg | 51 | 335 | 6.6 | Cell adhesion |
| CG3397 | 119 | 529 | 4.4 | Ion-channel |
| Cpr49Ah | 284 | 842 | 3.0 | Structural constituent of cuticle |
| 受体/载体蛋白 (6种) | ||||
| CytC1 | 48 | 372 | 7.8 | Electron transporter |
| glob1 | 120 | 682 | 5.6 | Oxygen transporter |
| Cyp6d2 | 139 | 745 | 5.3 | Electron transporter |
| CG11897 | 109 | 487 | 4.4 | Multidrug transporter |
| slf | 215 | 886 | 4.1 | C-lectin like |
| CG10126 | 134 | 480 | 3.6 | Calcium ion binding |
| 其他蛋白 (27种) | ||||
| JhI-26 | 77 | 348 | 4.5 | Juvenile hormone-inducible protein |
| Thor | 140 | 575 | 4.1 | Immune response |
| bgcn | 920 | 2,469 | 2.7 | RNA-binding protein |
| rev7 | 155 | 550 | 3.5 | Cell cycle regulator |
| upd1 | 233 | 724 | 3.0 | Receptor binding |
| Nplp2 | 219 | 660 | 3.0 | Neuropeptide hormone |
| CG14786 | 123 | 343 | 2.8 | Cell cycle |
| Cul-2 | 467 | 1,298 | 2.8 | Nuclear ubiquitin ligase complex |
| CG8927 | 140 | 374 | 2.7 | Exocytosis |
| CG4858 | 440 | 1,158 | 2.6 | Nucleotide binding |
| ver | 148 | 558 | 3.8 | Telomere capping |
| Ude | 136 | 376 | 2.7 | DNA catabolic process |
| Qtzl | 307 | 803 | 2.6 | Metabolic process |
| vir-1 | 168 | 426 | 2.5 | Defense response to virus |
| CG12640 | 164 | 409 | 2.5 | ATP binding |
| Arc2 | 14 | 723 | 53.4 | |
| CG14059 | 237 | 3,659 | 15.4 | |
| CG15784 | 415 | 4,120 | 9.9 | |
| CG2909 | 110 | 831 | 7.6 | |
| Osi14 | 124 | 602 | 4.8 | |
| TwdlE | 195 | 826 | 4.2 | |
| CG6353 | 230 | 752 | 3.2 | |
| CG16787 | 112 | 356 | 3.2 | |
| CG15347 | 143 | 412 | 2.9 | |
| CG9411 | 38 | 127 | 3.3 | |
| Broadened | 307 | 754 | 2.4 |
Table 2
Down-regulated genes in fred-RNAi microarray analysis"
| 基因/别名 | 平均对照信号 | 平均实验信号 | 差异倍数 | 功能/同源性 |
|---|---|---|---|---|
| 转录因子 (20种) | ||||
| Doc3 | 294 | 104 | 2.8 | P53 like transcription factor |
| klu | 355 | 132 | 2.7 | Zn finger (C2H2) |
| sr | 316 | 116 | 2.7 | Zn finger (C2H2) |
| dve | 561 | 225 | 2.5 | Homeobox |
| pnr | 284 | 127 | 2.2 | Zn finger (GATA) |
| ap | 1,149 | 564 | 2.0 | Homeobox/LIM domain |
| E(spl)mβ | 3,930 | 1,940 | 2.0 | N signaling pathway |
| psq | 747 | 377 | 2.0 | bHLH |
| salm | 508 | 249 | 2.0 | Transcription factor |
| ara | 596 | 321 | 1.9 | Homeobox |
| vg | 1,250 | 665 | 1.9 | Zn finger (GATA) |
| grn | 341 | 190 | 1.8 | Zn finger (GATA) |
| hth | 1,638 | 932 | 1.8 | Homeobox |
| mirr | 937 | 526 | 1.8 | Homeobox |
| grh | 767 | 453 | 1.7 | bHLH |
| E(spl)m7 | 1,084 | 656 | 1.7 | N signaling pathway |
| E(spl)mδ | 573 | 363 | 1.6 | N signaling pathway |
| E(spl)m3 | 1,901 | 1,183 | 1.6 | N signaling pathway |
| exd | 1,085 | 659 | 1.6 | Homeobox |
| nub | 396 | 167 | 2.4 | POU domain |
| 信号转导蛋白 (2种) | ||||
| E(spl)m2 | 582 | 263 | 2.2 | N signaling pathway |
| E(spl)mα | 1,525 | 722 | 2.1 | N signaling pathway |
| 酶 (15种) | ||||
| Gnpda | 594 | 229 | 2.6 | Glucosamine-6-phosphate deaminase |
| CG4914 | 733 | 288 | 2.5 | Serine endopeptidase |
| CG42514 | 1,633 | 665 | 2.4 | Adenylate cyclase |
| CG16733 | 437 | 186 | 2.3 | Retinol dehydratase |
| fbp | 397 | 170 | 2.3 | Fructose-bisphosphatase |
| Ance | 2,318 | 1,031 | 2.2 | Peptidyl-dipeptidase |
| Fkbp14 | 438 | 210 | 2.1 | Peptidyl-prolyl cis-trans isomerase |
| Spn43Aa | 2,371 | 1,155 | 2.1 | Serine protease inhibitor |
| SAK | 694 | 342 | 2.0 | Serine/threonine kinase |
| tok | 676 | 349 | 2.0 | Procollagen C-endopeptidase |
| RasGAP1 | 253 | 135 | 1.9 | EGFR signaling antagonist |
| CG9416 | 439 | 85 | 5.2 | Peptidase |
| Tpst | 504 | 229 | 2.2 | Protein-tyrosine sulfotransferase |
| Cht3 | 592 | 282 | 2.1 | Chitinase activity |
| Cht1 | 877 | 420 | 2.1 | Chitinase activity |
| 细胞黏附 (2种) | ||||
| CG5758 | 284 | 107 | 2.6 | Beta-Ig-H3/Fasciclin domain |
| leak | 645 | 308 | 2.1 | Immunoglobulin C-2 type |
| 受体/载体蛋白 (7种) | ||||
| CG10960 | 266 | 74 | 3.6 | Glucose transporter |
| Cyp310a1 | 628 | 187 | 3.4 | Electron transporter |
| CG3649 | 241 | 82 | 2.9 | Sodium symporter |
| CG32447 | 248 | 99 | 2.5 | GABA-B-like receptor |
| mnd | 282 | 125 | 2.3 | Amino acid transporter |
| LpR2 | 379 | 180 | 2.1 | Low-density lipoprotein receptor |
| CG1607 | 1,494 | 720 | 2.1 | Amino acid transporter |
| 其他蛋白 (14种) | ||||
| wbl | 573 | 113.4 | 3.6 | Protein processing |
| ImpE3 | 445 | 147 | 3.0 | Imaginal disc eversion |
| bnb | 5,095 | 1,706 | 3.0 | Gliogenesis |
| cpb | 2,227 | 855 | 2.6 | F-actin capping |
| CG3770 | 453 | 199 | 2.3 | Cell polarity |
| RpS12 | 511 | 227 | 2.2 | Structural constituent of ribosome |
| ph-p | 469 | 217 | 2.2 | DNA binding |
| ImpE2 | 10,453 | 4,875 | 2.1 | Imaginal disc eversion |
| Tl | 334 | 162 | 2.1 | Antimicrobial humoral response |
| Lcp2 | 1,408 | 683 | 2.1 | Structural constituent of cuticle |
| bib | 251 | 144 | 1.7 | Connexon channel activity |
| ana | 857 | 501 | 1.7 | Secreted glycoprotein |
| neo | 1,700 | 618 | 2.8 | Regulation of embryonic cell shape |
| CG15905 | 629 | 267 | 2.4 |
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