遗传 ›› 2007, Vol. 29 ›› Issue (6): 731-731―737.doi: 10.1360/yc-007-0731

• 研究报告 • 上一篇    下一篇

玉米不育系及其保持系线粒体atp6基因转录本编辑位点研究

汪静1; 曹墨菊1,2; 朱英国2; 潘光堂1; 荣廷昭1   

  1. 1.四川农业大学玉米研究所/作物基因资源与遗传改良教育部重点实验室, 雅安 625014;
    2.武汉大学植物发育生物学教育部重点实验室, 武汉 430072

  • 收稿日期:2006-09-08 修回日期:2006-12-13 出版日期:2007-06-10 发布日期:2007-06-10
  • 通讯作者: 汪静

The editing sites in the transcripts of mitochondrial atp6 gene of maize sterile lines and maintainer line

WANG Jing1; CAO Mo-Ju1, 2; ZHU Ying-Guo2; PAN Guang-Tang1; RONG Ting-Zhao1   

  1. 1. Maize Research Institute/Key Laboratory of Ministry of Education for Crop Genetic Resource and Improvement, Sichuan Agricultural University, Ya’an 625014, China;
    2. Key Laboratory of Ministry of Education for Plant Developmental Biology, Wuhan University, Wuhan 430072, China
  • Received:2006-09-08 Revised:2006-12-13 Online:2007-06-10 Published:2007-06-10
  • Contact: WANG Jing

摘要: 以玉米同核异质细胞质雄性不育系T黄早四、C黄早四、S黄早四以及保持系N黄早四为材料, 比较研究了供试材料小孢子发育到单核期的线粒体atp6基因转录本保守区域的编辑位点。结果表明, DNA序列在T、C、S 3种胞质中完全一致, 与N胞质相比除在27、28核苷酸处不同外, 其余均一致, 而各胞质cDNA序列却不尽相同。DNA和cDNA序列比较显示: atp6基因转录本保守区域内, N、S胞质中均存在19个编辑位点, T胞质存在22个, C胞质存在20个, 它们相同的编辑位点有18个。大多数编辑位点都发生在密码子的第一、二位点上, 可改变氨基酸的种类。18个相同的编辑位点大都为完全编辑, 其中第1位点在各胞质中为部分编辑, 第19位点除在N胞质中为完全编辑外其余胞质都为部分编辑。而各胞质特有编辑位点均以部分编辑的形式出现。由此可见, 在玉米中atp6基因RNA编辑不仅具有序列特异性, 同时还受到胞质背景的影响。通过分析还可看出, 编辑的C残基前一个碱基多为嘧啶类碱基, 编码氨基酸Ser和Pro的密码子较其他类的密码子更易受到编辑, 且植物RNA的编辑有着改变蛋白质疏水性、增加物种间保守性的倾向。

关键词: 玉米, 细胞质雄性不育, atp6, 线粒体, RNA编辑

Abstract: Using maize (Zea mays L.) cytoplasmic male-sterile lines T Huang Zao Si, C Huang Zao Si, S Huang Zao Si and maintainer line N Huang Zao Si as the plant materials, editing sites in the conservative area of mitochondrial atp6 gene transcripts of the 4 experimental materials’ tassels, of which microspores had developed to uni-nucleate stage, were analyzed. The results showed that DNA sequences of the T, C and S male-sterile cytoplasms were completely unanimous, while being compared with the N-cytoplasm, all the sequences were similar except for the 27th and 28th nucleotides. However, the cDNA sequences of each cytoplasm were not always the same. By comparing DNA and cDNA sequences, we found that within the conservative area of atp6 gene transcripts there were 19, 22, 20 and 19 editing sites in the N, T, C and S cytoplasms, respectively. The 4 cytoplasms also shared 18 sites. The majority of the editings occurred at the 1st or the 2nd position of codons, which might alter the amino acid type. Most the shared editings were fully editing, and the 1st and the 19th sites were partially edited in nearly all cytoplasms, except for the 19th sites editing in the N-cytoplasm. The specific editings in each cytoplasm occurred in the form of partially editing. Thus the editing of atp6 gene in maize was not only sequence specific but also affected by cytoplasmic background. Furthermore, plant RNA editing was inclined to improve the pre-dicted protein’s hydrophobicity and enhance the conservation among species.