[1] Jacob F, Monod J. Genetic regulatory mechanisms in the synthesis of proteins. J Mol Biol, 1961, 3(3): 318–356. <\p>
[2] Balakirev ES, Ayala FJ. Pseudogenes: are they “junk” or functional DNA? Annu Rev Genet, 2003, 37: 123–151. <\p>
[3] Zhang RK, Zhang L, Yu WQ. Genome-wide expression of non-coding RNA and global chromatin modification. Acta Biochim Biophys Sin, 2012, 44(1): 40–47. <\p>
[4] Muers M. RNA: Genome-wide views of long non-coding RNAs. Nat Rev Genet, 2011, 12(11): 742–743. <\p>
[5] Hertel J, de Jong D, Marz M, Rose D, Tafer H, Tanzer A, Schierwater B, Stadler PF. Non-coding RNA annotation of the genome of Trichoplax adhaerens. Nucleic Acids Res, 2009, 37(5): 1602–1615. <\p>
[6] Yang F, Yi F, Zheng ZG, Ling ZQ, Ding JN, Guo JF Mao WM, Wang XB, Ding XX, Liang ZF, Du Q. Characterization of a carcinogenesis-associated long non-coding RNA. RNA Biol, 2012, 9(1): 110–116. <\p>
[7] Holley RW, Apgar J, Everett GA, Madison JT, Marquisee M, Merrill SH, Penswick JR, Zamir A. Structure of a ribonucleic acid. Science, 1965, 147(3664): 1462–1465. <\p>
[8] Bachellerie JP, Cavaillé J, Hüttenhofer A. The expanding snoRNA world. Biochimie, 2002, 84(8): 775–790. <\p>
[9] Van Stijn T, Galloway S. A BamHI polymorphism at the ovine inactive X-specific transcript locus (XIST). Anim Genet, 1995, 26(4): 279–280. <\p>
[10] Brockdorff N, Ashworth A, Kay GF, McCabe VM, Norris DP, Cooper PJ, Swift S, Rastan S. The product of the mouse Xist gene is a 15 kb inactive X-specific transcript containing no conserved ORF and located in the nucleus. Cell, 1992, 71(3): 515–526. <\p>
[11] Okazaki Y, Furuno M, Kasukawa T. Analysis of the mouse transcriptome based on functional annotation of 60, 770 full-length cDNAs. Nature, 2002, 420(6915): 563–573. <\p>
[12] Rinn JL, Kertesz M, Wang JK, Squazzo SL, Xu X, Brugmann SA, Goodnough LH, Helms JA, Farnham PJ, Segal E, Chang HY. Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs. Cell, 2007, 129(7): 1311–1323. <\p>
[13] Mattick JS. The genetic signatures of noncoding RNAs. PLoS Genet, 2009, 5(4): e1000459. <\p>
[14] Ponting CP, Oliver PL, Reik W. Evolution and functions of long noncoding RNAs. Cell, 2009, 136(4): 629–641. <\p>
[15] Koslowsky DJ, Bhat GJ, Read LK, Stuart K. Cycles of progressive realignment of gRNA with mRNA in RNA editing. Cell, 1991, 67(3): 537–546. <\p>
[16] Moran VA, Perera RJ, Khalil AM. Emerging functional and mechanistic paradigms of mammalian long non-coding RNAs. Nucleic Acids Res, 2012, 40(14): 6391–6400. <\p>
[17] Inagaki S, Numata K, Kondo T, Tomita M, Yasuda K, Kanai A, Kageyama Y. Identification and expression analysis of putative mRNA-like non-coding RNA in Drosophila. Genes Cells, 2005, 10(12): 1163–1173. <\p>
[18] Ravasi T, Suzuki H, Pang KC, Katayama S, Furuno M, Okunishi R, Fukuda S, Ru K, Frith MC, Gongora MM, Grimmond SM, Hume DA, Hayashizaki Y, Mattick JS. Experimental validation of the regulated expression of large numbers of non-coding RNAs from the mouse genome. Genome Res, 2006, 16(1): 11–19. <\p>
[19] Mercer TR, Dinger ME, Sunkin SM, Mehler MF, Mattick JS. Specific expression of long noncoding RNAs in the mouse brain. Proc Natl Acad Sci USA, 2008, 105(2): 716– 721. <\p>
[20] Zhang XQ, Lian Z, Padden C, Gerstein MB, Rozowsky J, Snyder M, Gingeras TR, Kapranov P, Weissman SM, Newburger PE. A myelopoiesis-associated regulatory intergenic noncoding RNA transcript within the human HOXA cluster. Blood, 2009, 113(11): 2526–2534. <\p>
[21] Coudert AE, Pibouin L, Vi-Fane B, Thomas BL, Macdougall M, Choudhury A, Robert |