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• 综述 •    

后GWAS时代基因组功能变异的高通量鉴定方法及其在农业动物中的应用

尹心怡1,2,3,王守志1,2,3   

  1. 1. 农业农村部鸡遗传育种重点实验室,哈尔滨 150030

    2. 黑龙江省普通高等学校动物遗传育种与繁殖重点实验室,哈尔滨 150030

    3. 东北农业大学动物科学技术学院,哈尔滨 150030
  • 发布日期:2026-03-04
  • 基金资助:
    国家自然科学基金项目(编号: 32372867),国家农业科技重大项目(编号: NK20221001)和国家现代农业产业技术体系(编号:CARS-41)资助

High-throughput identification methods of genomic functional variation in post-GWAS era and their application in agricultural animals

Xinyi Yin1,2,3, Shouzhi Wang1,2,3   

  1. 1. Key Laboratory of Chicken Genetics and Breeding, Ministry of Agriculture and Rural Affairs, Harbin 150030, China

    2. Key Laboratory of Animal Genetics, Breeding and Reproduction, Education Department of Heilongjiang Province, Harbin 150030, China

    3. College of Animal Science and Technology, Northeast Agricultural University, Harbin 150030, China
  • Online:2026-03-04
  • Supported by:
    Supported by the National Natural Science Foundation of China (No. 32372867), National Major Agricultural Science and Technology Project (No. NK20221001), and China Agriculture Research System of MOF and MARA (No. CARS-41)

摘要: 全基因组关联分析(genome-wide association study,GWAS)已鉴定出大量与人类疾病和动植物经济性状显著关联的遗传变异。然而,由于多数变异位于基因组的非编码区域,使得从众多变异位点中准确识别具有生物学功能的变异仍面临巨大挑战性。进入后GWAS时代,以高通量报告基因分析、CRISPR/Cas9基因编辑技术及表观遗传学分析为代表的高通量解析方法,已成为系统揭示基因组中功能变异的有力工具。这些方法不仅能够有效识别功能性变异,还可以揭示其调控基因表达的机制,从而阐明影响性状或疾病形成的分子基础。本文系统综述了当前用于基因组功能性变异的高通量鉴定方法,总结了其在主要农业动物的应用进展,并对其未来研究前景进行展望,以期为后续相关领域研究提供参考。

关键词: 农业动物, GWAS, 功能性变异, 基因表达调控

Abstract: Genome-wide association study (GWAS) has identified a large number of genetic variations that are significantly associated with human diseases and animal and plant economic traits. However, since the majority of these variants are located in non-coding regions of the genome, accurately pinpointing functional variants with biological significance from a vast number of candidate loci poses significant challenges. In the post-GWAS era, high-throughput analytical approaches, such as high-throughput reporter gene analysis, CRISPR/Cas9-based gene editing technologies, and epigenetic analyses, have become powerful tools for systematically uncovering functional variants in the genome. These methods not only enable efficient identification of functional variants but also help elucidate the mechanisms through which they regulate gene expression, thereby clarifying the molecular basis underlying trait formation or disease pathogenesis. In this review, we systematically summarize current high-throughput strategies for identifying functional genomic variants, highlight their applications and recent advances in major agricultural animal species, and outline future research directions, with the aim of providing a reference for subsequent studies in related fields.

Key words: agricultural animals, GWAS, functional variant, gene expression regulation