遗传 ›› 2008, Vol. 30 ›› Issue (7): 877-884.doi: 10.3724/SP.J.1005.2008.00877

• 研究报告 • 上一篇    下一篇

长爪沙鼠的遗传多样性分析

丁贤明1; 钱宝珍1; Matsuda Junichiro 2 ; Koura Minako2; 萨晓婴3; 施张奎3   

  1. 1. 浙江省医学科学院生物工程研究所, 杭州 310013;
    2. 日本国家实验动物中心, 大阪;
    3. 浙江省医学科学院实验动物中心, 杭州 310013

  • 收稿日期:2007-12-07 修回日期:2008-02-02 出版日期:2008-07-10 发布日期:2008-07-10
  • 通讯作者: 钱宝珍

Genetic diversity of Mongolian gerbils(Meriones unguiculatus)

DING Xian-Ming1; QIAN Bao-Zhen1; Matsuda Junichiro 2; Koura Minako2;
SA Xiao-Ying3; SHI Zhang-Kui3   

  1. 1. Institute of Bio-engineering, Zhejiang Academy of Medical Sciences, Hangzhou 310013, China;
    2. National Institute of Biomedical Innovation, Osaka, Japan;
    3. Laboratory Animal Center, Zhejiang Academy of Medical Sciences, Hangzhou 310013, China
  • Received:2007-12-07 Revised:2008-02-02 Online:2008-07-10 Published:2008-07-10
  • Contact: QIAN Bao-Zhen

摘要:

利用17个微卫星DNA标记对Z:ZCLA长爪沙鼠封闭群、野生群和近交系进行遗传多样性分析, 评估群体内的遗传变异和群体间的遗传分化。结果表明:在Z:ZCLA封闭群和野生群中共有9个微卫星DNA标记获得稳定的结果, 分别为AF200940、AF200941、AF200942、AF200945、AF200946、AF200947、D11Mit128、PKCSCN, 共检测到41个等位基因, 每个基因的等位基因数从1~7不等, 片段大小在120~283 bp之间, 所有位点的平均期望杂合度(He)和多态信息含量(PIC)值分别为0.5032和0.4656, Z:ZCLA封闭群和野生群9个微卫星位点平均有效等位基因数分别为2.78和2.89, 平均基因杂合度分别为0.3704和 0.3893, 平均多态信息含量分别为0.3256和0.3344, 两个群体都表现为中度多态, Z:ZCLA封闭群较野生群稍低; 在3个近交系中共有8个位点获得稳定的扩增结果, 分别为AF200941、AF200942、AF200945、AF200946、AF200947、D11Mit128、PKCSCN, 共检测到11个等位基因, 片段大小在140~241 bp之间, 其中5个位点在群体内表现为单态纯合, 3个位点在群体内表现为单态杂合, 所有位点在群体内和群体间均呈单态性, 表明这3个长爪沙鼠品系基本符合近交系的要求, 微卫星标记技术适用于近交系长爪沙鼠的遗传检测。

关键词: 遗传监测, 长爪沙鼠, 微卫星DNA

Abstract:

Genetic diversity of Z:ZCLA Mongolian gerbils, wild Mongolian gerbils and 3 inbred M. gerbil strains was evaluated with 17 microsatellite loci. The genetic variabilities within and between populations were estimated. The results showed that 9 microsatellite DNA, AF200940, AF200941, AF200942, AF200945, AF200946, AF200947, D11Mit128, PKC, and SCN, were amplified efficiently both in Z:ZCLA M. gerbils and the wild M. gerbils. Forty-one alleles were amplified with the number of alleles per locus ranging from 1 to 7. The average expected heterozygosity (He) and polymorphism information content (PIC) of all the loci were 0.5032 and 0.4656, respectively. The mean effective allele number of Z:ZCLA M. gerbils and wild M. gerbils were 2.78 and 2.89. The PIC of Z:ZCLA M. gerbils and the wild M. gerbils were 0.3704 and 0.3893. In the 3 inbred M. gerbils strains, 8 microsatellite DNA were amplified efficiently with 11 alleles. It displayed heterozygosity in AF200941, AF200945, AF200946, D11Mit128, and SCN loci with fragment lengths from 140 to 215 bp; and homozygosity in AF200942, AF200946, and AF200947 with fragment lengths from 203 to 241 bp. All of the 8 microsatel-lite loci were monomorphic both within and among the strains. These results suggested that the moderate genetic diversity of the conventional closed colony of Z:ZCLA M. gerbils was observed; and inbred M. gerbils strains basically met the re-quest. Microsatellite markers can be used in monitoring of M. gerbils populations.