表观遗传变异及其在作物改良中的应用

doi:10.3724/SP.J.1005.2014.0469

[an error occurred while processing this directive]

HEREDITAS(Beijing) ›› 2014, Vol. 36 ›› Issue (5): 469-475.doi: 10.3724/SP.J.1005.2014.0469

Previous Articles Next Articles

Epigenetic variation and its application in crop improvement

Jing Jiang^1,2, Qian Qian², Bojun Ma¹, Zhenyu Gao²

1. College of Chemistry and Life Science, Zhejiang Normal University, Jinhua 321004, China;
2. State Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China

Received:2013-12-05 Revised:2014-02-25 Online:2014-05-20 Published:2014-05-25

Abstract

Abstract:

Heritable variations in natural populations, including genetic variation and epigenetic variation, are the motivation for adaptation and evolution of plant species. Germplasm can be transferred stably from generation to generation by mitosis and/or meiosis without alteration in DNA sequence and protein expression. Here, two important sources of epigenetic variation, distant hybridization and polyploidy, and various biotic and abiotic stresses, are introduced. The application of epigenetic variation in crop improvement and its limitation, as well as optional solutions, are also summarized.

Key words: epigenetic variation, stress, distant hybridization, crop improvement

Jing Jiang, Qian Qian, Bojun Ma, Zhenyu Gao. Epigenetic variation and its application in crop improvement[J]. HEREDITAS(Beijing), 2014, 36(5): 469-475.

References

[1] Waddington CH. Canalization of development and the in-heritance of acquired characters. Nature, 1942, 150(3811): 563–565. <\p>

[2] Bird AP. DNA methylation patterns and epigenetic mem-ory. Genes Development, 2002, 16(1): 6–21. <\p>

[3] Springer NM. Epigenetics and crop improvement. Trends Genet, 2013, 29(4): 241–247. <\p>

[4] Lauria M, Rupe M, Guo M, Kranz E, Pirona R, Viotti A, Lund G. Extensive maternal DNA hypomethylation in the endosperm of Zea mays. Plant Cell, 2004, 16(2): 510–522. <\p>

[5] Kinoshita T, Miura A, Choi Y, Kinoshita Y, Cao X, Jacobsen SE, Fischer RL, Kakutani T. One-way control of FWA imprinting in Arabidopsis endosperm by DNA me-thylation. Science, 2004, 303(5657): 521–523. <\p>

[6] Zhang MS, Yan HY, Zhao N, Lin XY, Pang JS, Xu KZ, Liu LX, Liu B. Endosperm-specific hypomethylation, and meiotic inheritance and variation of DNA methylation level and pattern in sorghum (Sorghum bicolor L.) inter- strain hybrids. Theor Appl Genet, 2007, 115(2): 195–207. <\p>

[7] Cui XK, Jin P, Cui X, Gu LF, Lu ZK, Xue YM, Wei LY, Qi JF, Song XY, Luo M, An GH, and Cao XF. Control of transposon activity by a histone H3K4 demethylase in rice. Proc Natl Acad Sci USA, 2013, 110(5): 1953–1958. <\p>

[8] Ding Y, Wang X, Su L, Zhai JX, Cao SY, Zhang DF, Liu YC, Bi YP, Qian Q, Cheng ZK, Chu CC, Cao XF. SDG714, a histone H3K9 methyltransferase, is involved in Tos17 DNA methylation and transposition in rice. Plant Cell, 2007, 19(1): 9–22. <\p>

[9] 文戈, 田云, 方俊, 卢向阳. 表观遗传与分子育种. 江西农业学报, 2011, 23(6): 23–24. <\p>

[10] Lewin B. GeneⅦ. Pemmon Prentice Hall Press, 2004: 735–749. <\p>

[11] Chodavarapu RK, Feng S, Bernatavichute YV, Chen PY, Stroud H, Yu YC, Hetzel JA, Kuo F, Kim J, Cokus SJ. Relationship between nucleosome positioning and DNA methylation. Nature, 2010, 466(7304): 388–392. <\p>

[12] 邓衍明, 叶晓青, 佘建明, 汤日圣. 植物远缘杂交育种研究进展. 华北农学报, 2011, 26(S2): 52–55. <\p>

[13] Schranz ME, Osborn TC. Novel flowering time variation in the resynthesized polyploid Brassica napus. J Heredity, 2000, 91(3): 242–246. <\p>

[14] Comail L, Tyagi AP, Winter K, Holmes-Davis R, Reynolds SH, Stevens Y, Byers B. Phenotypic instability and rapid gene silencing in newly formed Arabidopsis allopoly-ploids. Plant Cell, 2000, 12(9): 1551–1567. <\p>

[15] Zhao XX, Chai Y, Liu B. Epigenetic inheritance and variation of DNA methylation level and pattern in maize intra- specific hybrids. Plant Sci, 2007, 172(5): 930–938. <\p>

[16] Chandler VL. Paramutation: from maize to mice. Cell, 2007, 128(4): 641–645. <\p>

[17] 刘宝. 表观遗传变异与作物遗传改良. 吉林农业大学学报, 2008, 30(4): 386–393. <\p>

[18] 余丽. 表观遗传学的研究和进展. 安徽农业科学, 2010, 38(2): 588–591. <\p>

[19] Madlung A, Masuelli RW, Watson B, Reynolds SH, Davi-son J, Comai L. Remodeling of DNA methylation and phenotypic and transcriptional changes in synthetic Arabidopsis allotetraploids. Plant Physiol, 2002, 129(2): 733–746. <\p>

[20] Cubas P, Vincent C, Coen E. An epigenetic mutation re-sponsible for natural variation in floral symmetry. Nature, 1999, 401(6749): 157–161. <\p>

[21] 冯德江, 刘翔, 朱桢. 转录后基因沉默－植物抵御外来病毒入侵的一种机制. 遗传学报, 2003, 30(6): 589–596. <\p>

[22] 杨俊宝, 彭正松. 多倍体植物的表观遗传现象. 遗传, 2005, 27(2): 335–342. <\p>

[23] Feil R, Fraga MF. Epigenetics and the environment: emerging patterns and implications. Nat Rev Genet, 2012, 13(2): 97–109. <\p>

[24] Lukens LN, Zhan S. The plant genome’s methylation status and response to stress: implications for plant im-provement. Curr Opin Plant Biol, 2007, 10(3): 317–322. <\p>

[25] Chinnusamy V, Zhu JK. Epigenetic regulation of stress response

Metrics

Comments

www.chinagene.cn
备案号：京ICP备09063187号

Epigenetic variation and its application in crop improvement

PDF (PC)

Knowledge

Abstract

Cite this article

share this article

References

Related Articles 15

Recommended Articles

Metrics

Comments

[1]	Qianwen Lv, Yongfang Yang. The biological functions of peptide signaling in plant and the advances on its utilization for crop improvement [J]. Hereditas(Beijing), 2023, 45(9): 813-828.
[2]	Qianbin Zhu, Zhicheng Gan, Xiaocui Li, Yingjie Zhang, Heming Zhao, Xianzhong Huang. Genome-wide identification, phylogenetic and expression of MAPKKK gene family in Arabidopsis pumila [J]. Hereditas(Beijing), 2022, 44(11): 1044-1055.
[3]	Liwen Wu, Jie Zeng, Yunxin Xue, Xilin Zhao. Progress on the function and regulatory mechanisms of bacterial Cpx signal transduction system [J]. Hereditas(Beijing), 2021, 43(8): 747-757.
[4]	Jie Yuan, Shiqing Cai. The regulatory mechanisms of behavioral and cognitive aging [J]. Hereditas(Beijing), 2021, 43(6): 545-570.
[5]	Xiaocui Li, Kaicheng Kang, Xianzhong Huang, Yongbin Fan, Miaomiao Song, Yunjie Huang, Jiajia Ding. Genome-wide identification, phylogenetic analysis and expression profiling of the MKK gene family in Arabidopsis pumila [J]. Hereditas(Beijing), 2020, 42(4): 403-421.
[6]	Yu Huang,Siqi Hu,Fei Guo. Interaction between stress granules and viruses [J]. Hereditas(Beijing), 2019, 41(6): 494-508.
[7]	Zeqin Li,Jintao Li,Jie Bing,Genfa Zhang. The role analysis of APX gene family in the growth and developmental processes and in response to abiotic stresses in Arabidopsis thaliana [J]. Hereditas(Beijing), 2019, 41(6): 534-547.
[8]	Haoqiang Yu,Fuai Sun,Wenqi Feng,Fengzhong Lu,Wanchen Li,Fengling Fu. The BES1/BZR1 transcription factors regulate growth, development and stress resistance in plants [J]. Hereditas(Beijing), 2019, 41(3): 206-214.
[9]	Wang Dezhou,Mo Xiaoting,Zhang Xia,Xu Miaoyun,Zhao Jun,Wang Lei. Isolation and functional characterization of a stress-responsive transcription factor ZmC2H2-1 in Zea mays [J]. Hereditas(Beijing), 2018, 40(9): 767-778.
[10]	Qingqian Ding,Xiaoting Wang,Liqin Hu,Xin Qi,Linhao Ge,Weiya XU,Zhaoshi Xu,Yongbin Zhou,Guanqing Jia,Xianmin Diao,Donghong Min,Youzhi Ma,Ming Chen. MYB-like transcription factor SiMYB42 from foxtail millet (Setaria italica L.) enhances Arabidopsis tolerance to low-nitrogen stress [J]. Hereditas(Beijing), 2018, 40(4): 327-338.
[11]	Citao Liu, Wei Wang, Bigang Mao, Chengcai Chu. Cold stress tolerance in rice: physiological changes, molecular mechanism, and future prospects [J]. Hereditas(Beijing), 2018, 40(3): 171-185.
[12]	Jia Li,Yunhua Liu,Yu Zhang,Chen Chen,Xia Yu,Shunwu Yu. Drought stress modulates diurnal oscillations of circadian clock and drought-responsive genes in Oryza sativa L. [J]. Hereditas(Beijing), 2017, 39(9): 837-846.
[13]	Yifan Wang,Zhen Li,Jiaowen Pan,Yingxiu Li,Qingguo Wang,Guan Yan'an,Wei Liu. Cloning and functional analysis of the SiRLK35 gene in Setaria italic L. [J]. Hereditas(Beijing), 2017, 39(5): 413-422.
[14]	Xing Wang,Jilong Zhang,Xiuxiu Feng,Hongjie Li,Genfa Zhang. The molecular mechanisms of plant plasma membrane intrinsic proteins trafficking and stress response [J]. Hereditas(Beijing), 2017, 39(4): 293-301.
[15]	Shuaiqi Zhu,Yifu Gong,Li Zhang,Kai Yu,Heyu Wang,Xiaojun Yan. Expression analysis of different β-carotenoid hydroxylase gene families in stress response in Dunaliella viridis [J]. Hereditas(Beijing), 2017, 39(2): 156-165.