遗传 ›› 2006, Vol. 28 ›› Issue (5): 540-544.

• 研究报告 • 上一篇    下一篇

罗氏沼虾不同群体线粒体COI基因的序列差异和遗传标记研究

杨学明1;郭亚芬2;陈福艳1;蒋钦杨2;梁万文1;蒋和生2   

  1. 1.广西水产研究所,南宁 530021; 2.广西大学动物科技学院,南宁 530005

  • 收稿日期:2005-05-31 修回日期:2005-07-12 出版日期:2006-05-10 发布日期:2006-05-10
  • 通讯作者: 郭亚芬

Intraspecific DNA Sequence Polymorphism and genetic markers in Mitochondrial COI Gene from Three Populations of Macrobrachium rosenbergii

YANG Xue-Ming1, GUO Ya-Fen2, CHEN Fu-Yan1, JIANG Qin-Yang2, 
LIANG Wan-Wen1, JIANG He-Sheng2 

  

  1. 1.Guangxi Fisheries Institute, Nanning 530021,China; 
    2.College of Animal Science and Technology, Guangxi University, Nanning  530005, China

  • Received:2005-05-31 Revised:2005-07-12 Online:2006-05-10 Published:2006-05-10
  • Contact: GUO Ya-Fen

摘要:



利用PCR方法扩增获得罗氏沼虾(Macrobrachium rosenbergii)线粒体DNA的COI基因,测定该基因片段序列。分析了罗氏沼虾缅甸原种F1代、江苏养殖群体和广西选育F2代3个群体共17只个体的序列核苷酸位点差异和遗传多态。结果表明,缅甸原种F1代遗传多样性最为丰富,江苏养殖群体和广西选育群体的遗传多样性相对贫乏。在长度为498 bp的基因片段中,共检测到10个多态性核苷酸位点(占2.01%),17只个体具有5种基因型,3群体各自的平均核苷酸位点差异分别为0.88%、0.07%和0。UPGMA分子系统聚类树显示,江苏养殖群体和广西选育群体的遗传关系最近,其单倍型混杂聚成一支,而缅甸原种F1群体相对独立为另外一支。COI基因可以作为区分两分支群体的遗传标记。


关键词: 遗传标记, 序列多态性, COI基因, 罗氏沼虾

Abstract: The mitochondrial DNA COI genes of 17 individuals from three populations of Macrobrachium rosenbergii (F1 of Burma wild population, Jiangsu cultured population and F2 of Guangxi breeding population) were amplified by PCR method and totally sequenced。498bp long of partial nucleotide sequences were aquired and applied to study the genetic diversity difference among this three populations。The analytical results indicated that in the COI gene locus, F1 of Burma wild population had relatively abundant genetic polymorphism,while polymorphism of Jiangsu cultured population and Guangxi breeding population were very poor。10 polymorphic sites and 5 haplotypes were found in the sequences of 17 individuals。The average nucleotide divergences in three populations respectively were 0.88%,0.07% and 0,The UPGMA phylogenetic tree suggested that F2 of Guangxi breeding population and Jiangsu cultured population had a closer genetic relationship,their individuals gathered together to be a genetic branch;F1 of Burma wild population diverged to be another relatively independent branch。 For the distinct nucleitide differences, COI gene was suitable as a genetic marker to distinguish this two branch of Macrobrachium rosenbergii population。

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