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• 研究报告 •    

出生后小鼠心肌组织生长发育的转录组分析

朱晓聪1,王圣楠2,蒋琳2,刘书琴1   

  1. 1. 青岛农业大学动物科技学院,青岛 266109

    2. 中国农业科学院北京畜牧兽医研究所,北京 100193

  • 收稿日期:2024-11-13 修回日期:2025-03-20 出版日期:2025-04-21 发布日期:2025-04-21
  • 基金资助:
    山东省现代农业产业技术体系驴创新团队建设专项基金

Transcriptome analysis of postnatal mouse cardiac tissue growth and development

Xiaocong Zhu1, Shengnan Wang2, Lin Jiang2, Shuqin Liu1   

  1. 1.College of Animal Science and Technology, Qingdao Agricultural University, Qingdao 266109, China

    2.Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing 100193, China
  • Received:2024-11-13 Revised:2025-03-20 Published:2025-04-21 Online:2025-04-21

摘要: 哺乳动物出生后的心脏功能与心肌细胞增殖和肥大密切相关,但涉及调控心肌细胞增殖和肥大的分子机制尚未完全阐明。为此,本研究对7日龄(P7)和3月龄(3m)的C57BL/6雌性小鼠心脏组织进行了表型测定和转录组测序分析,以探究小鼠心脏发育过程中心肌细胞的变化规律,并筛选影响心脏生长发育的关键候选基因。与7日龄相比,3月龄小鼠心脏重量和心肌细胞横截面积均显著增加(P<0.001)。通过转录组测序共鉴定到3,858个差异表达基因(differentially expressed genes,DEGs),其中差异表达上调基因2,021个,差异表达下调基因1,837个。GO功能注释分析结果显示,差异表达基因显著富集于细胞周期、细胞分裂、心脏发育、器官发育、细胞增殖等条目中。KEGG富集分析结果表明,差异表达基因显著富集于DNA复制、ECM-受体相互作用、细胞周期、代谢途径等信号通路。此外,通过定位筛选到Hey2Foxm1Igf1Fgfr2Tbx20Fgf1Igf2等是与小鼠心肌组织生长发育相关的关键候选基因。qRT-PCR验证结果显示,与心脏发育相关的10个候选基因的表达趋势与RNA-seq结果相一致,说明测序结果的可靠性。本研究结果为进一步揭示小鼠心肌组织生长发育的分子机制提供了新的见解。

关键词: 小鼠, 心肌组织, 生长发育, 转录组分析

Abstract: Postnatal cardiac function in mammals is closely associated with cardiomyocyte proliferation and hypertrophy. However, the molecular mechanisms regulating cardiomyocyte proliferation and hypertrophy have not yet been fully elucidated. Therefore, this study conducted phenotypic measurements and transcriptomic sequencing analysis on cardiac tissues from 7-day-old (P7) and 3-month-old (3m) female C57BL/6 mice to investigate the changes in cardiomyocytes during cardiac development and to identify key candidate genes influencing cardiac growth and development. In comparison to 7-days-old mice, 3-month-old mice exhibited a significant increase in heart weight (P<0.001) and the cross-sectional area of cardiomyocytes (P<0.001). Transcriptome sequencing identified 3,858 differentially expressed genes (DEGs), including 2,021 up-regulated and 1,837 down-regulated genes. Gene Ontology (GO) functional annotation analysis demonstrated that the differentially expressed genes were significantly enriched in biological processes including cell cycle, cell division, cardiac morphogenesis, organogenesis, and cellular proliferation. KEGG pathway analysis were significantly enriched in DNA replication, ECM-receptor interaction, the cell cycle, metabolic pathways, and other signaling pathways. Furthermore, key candidate genes associated with myocardial tissue growth and development in mice, including Hey2, Foxm1, Igf1, Fgfr2, Tbx20, Fgf1, Igf2 and other genes, were identified through screening. qRT-PCR validation results demonstrated that the expression trends of the 10 candidate genes related to cardiac development were consistent with the RNA-seq results, confirming the reliability of the sequencing data. The findings of this study provide new insights into the molecular mechanisms underlying the growth and development of mouse myocardial tissue.

Key words: mice, myocardial tissue, growth and development, RNA-seq