遗传 ›› 2009, Vol. 31 ›› Issue (1): 88-94.doi: 10.3724/SP.J.1005.2009.00088

• 研究报告 • 上一篇    下一篇

半滑舌鳎雌性特异AFLP标记CseF783的克隆及其在遗传性别鉴定中的应用

马洪雨1, 2,陈松林1,李静1,田永胜1,季相山1,张立敬1

  

  1. 1. 中国水产科学研究院黄海水产研究所, 农业部海洋渔业资源可持续利用重点开放实验室, 青岛 266071;
    2. 中国海洋大学海洋生命学院, 青岛 266003

  • 收稿日期:2008-05-04 修回日期:2008-11-06 出版日期:2009-01-10 发布日期:2009-01-10
  • 通讯作者: 陈松林

Development of female-specific AFLP marker CseF783 and its application in genetic sex identification in half-smooth tongue sole (Cynoglossus semilaevis)

MA Hong-Yu1, 2,CHEN Song-Lin1,LI Jing1,TIAN Yong-Sheng1,JI Xiang-Shan1,ZHANG Li-Jing1   

  1. 1. Key Laboratory for Sustainable Utilization of Marine Fisheries Resources, Ministry of Agriculture, Yellow Sea Fisheries Research Insti-tute, Chinese Academy of Fishery Sciences, Qingdao 266071, China;
    2. College of Marine Life Sciences, Ocean University of China, Qingdao 266003, China
  • Received:2008-05-04 Revised:2008-11-06 Online:2009-01-10 Published:2009-01-10
  • Contact: CHEN Song-Lin

摘要:

半滑舌鳎性别控制和全雌育种等研究领域中迫切需要一种能够快速鉴定鱼类个体遗传性别的有效方法。文章采用AFLP技术, 利用选择性引物组合(E-ACT/M-CAA)从半滑舌鳎中筛选到一条雌性特异的AFLP标记。对该标记进行二次PCR扩增、琼脂糖凝胶回收、克隆、测序。分析表明, 序列全长为791 bp, 与GenBank中的序列无同源性。以该雌性特异AFLP标记DNA序列为模板, 设计了一对特异的PCR引物, 成功地将其转化为SCAR(Sequence characterized amplified regions)标记, 并在100尾已知性别的半滑舌鳎个体(雌雄各50尾)中进行验证, 结果表明, 该SCAR标记在所有雌性个体中均扩增得到一条长度为324 bp的DNA条带, 而在49尾雄性个体中均扩增不到该DNA条带(有1尾雄性个体例外), 证明该SCAR标记是雌性特异的, 并可用于半滑舌鳎个体遗传性别鉴定。随后, 利用该SCAR标记检测了3日龄半滑舌鳎幼苗, 结果表明, 雌性个体比例为41.7%。

关键词: 半滑舌鳎, 雌性特异AFLP标记, SCAR标记, 遗传性别, 鉴定

Abstract:

Molecular sex identification is important in studying sex control, sex determination, and all-female breeding in half-smooth tongue sole (Cynoglossus semilaevis). In the present study, a female-specific AFLP marker was isolated from Cynoglossus semilaevis by AFLP technique using the selective primer combination E-ACT/M-CAA. This marker was re-amplified, recovered from the agarose gels, cloned and sequenced. Bioinformatic analysis indicated that the length of the product was 791 bp, and the sequence showed no similarity to any known sequences deposited in the GenBank database using BLASTn. According to the DNA sequence of the female-specific AFLP marker, specific PCR primers were designed and PCR amplification was performed on 100 sex-known individuals of C. semilaevis (50 females and 50 males each). A specific band 324 bp in length was present in all females but absent in all males (except for one male), indicating that the female-specific AFLP marker was successfully converted into female-specific SCAR (sequence characterized amplified regions) marker. The sex analysis of 3-day-old C. semilaevis individuals using this female-specific SCAR marker indicated that the female ratio was 41.7%. The female-specific SCAR marker developed in this study allowed simple, reliable, and rapid molecular sex identification using small amounts of fin tissue without sacrifice of C. semilaevis especially at early stage of development.