遗传 ›› 2008, Vol. 30 ›› Issue (9): 1121-1126.doi: 10.3724/SP.J.1005.2008.01121

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水稻QTL图位克隆的特征分析

姜树坤; 徐正进; 陈温福

  

  1. 沈阳农业大学, 农业部作物生理生态遗传育种重点开放实验室, 辽宁省北方粳稻育种重点开放实验室, 沈阳 110161

  • 收稿日期:2008-02-26 修回日期:2008-05-15 出版日期:2008-09-10 发布日期:2008-09-10
  • 通讯作者: 姜树坤

Analysis of features of 15 successful positional cloning of QTL in rice

JIANG Shu-Kun; XU Zheng-Jin; CHEN Wen-Fu   

  1. Key Laboratory of Crop Physiology, Ecology, Genetics and Breeding, Ministry of Agriculture Key Laboratory of Northern Japonica Rice Breeding of Liaoning Province, Shenyang Agricultural University, Shenyang 110161, China
  • Received:2008-02-26 Revised:2008-05-15 Online:2008-09-10 Published:2008-09-10
  • Contact: JIANG Shu-Kun

摘要:

图位克隆作为基因克隆的最有效手段, 在水稻QTL克隆方面取得了很大的进展。文章通过分析近年来关于水稻QTL图位克隆的15个成功案例, 总结了水稻QTL图位克隆的几个重要特征: (1) 亲本杂交类型为种间或亚种间杂交, 双亲的目标性状差异显著; (2) 目标QTL为主效, 一般能解释大部分的表型变异; (3) 物理图距一般小于40 kb; (4)初级定位结果准确, 精细定位群体大于6 000(隐性群体不小于1 500)单株。文章还对QTL图位克隆的难点及解决方法进行了有益的探讨。

关键词: 特征, 图位克隆, 数量性状位点(QTL), 水稻

Abstract:

As the most efficient strategy in gene clone, positional cloning has been used widely in QTL cloning in rice. The objective of this paper is to make summary features of QTL positional cloning based on 15 successful positional cloning attempts. (1) most of the populations used in the analysis were derived from interspecific or intersubspecies; (2) the target QTL had been identified with very large phenotypic effects; (3) the candidate genomic region was usually narrowed down to 40 kb; (4) the primary mapping result was exact; and the fine mapping population was more than 6 000, while the number of recessive population was more than 1 500. Otherwise, the nodus of QTL positional cloning and the corresponding solving methods were discussed.