基于油桐种子3个不同发育时期转录组的油脂合成代谢途径分析

doi:10.3724/SP.J.1005.2013.01403

遗传 ›› 2013, Vol. 35 ›› Issue (12): 1403-1414.doi: 10.3724/SP.J.1005.2013.01403

• 研究报告 • 上一篇

基于油桐种子3个不同发育时期转录组的油脂合成代谢途径分析

陈昊^{1, 2}, 蒋桂雄^1,2, 龙洪旭^1,2, 谭晓风^1,2

1. 中南林业科技大学, 经济林培育与保护省部共建教育部重点实验室, 长沙410004;
2. 中南林业科技大学, 经济林育种与栽培国家林业局重点实验室, 长沙410004

收稿日期:2013-06-27 修回日期:2013-09-07 出版日期:2013-12-20 发布日期:2013-11-25
通讯作者: 谭晓风, 博士, 教授, 研究方向：林业生物技术。 E-mail:tanxiaofengcn@126.com
作者简介:陈昊, 博士, 讲师, 研究方向：林业生物技术。Tel：0731-85623406; E-mail: chenhao198223@sina.com
基金资助:
国家林业公益性行业科研专项重大项目(编号：201204403)资助

Analysis of oil synthesis metabolism pathways based on transcrip-tomechanges in tung oil tree’s seeds during three different develop-ment stages

CHEN Hao^1,2, JIANG Gui-Xiong^1,2, LONG Hong-Xu^1,2, TAN Xiao-Feng^1,2

1. The Key Lab of Cultivation and Protection for Non-wood Forest Trees of Education Ministry, Central South University of Forestry and Technology, Changsha 410004, China;
2. The Key Lab of Non-wood Forest Products of State Forestry Administration, Central South University of Forestry and Technology, Changsha 410004, China

Received:2013-06-27 Revised:2013-09-07 Online:2013-12-20 Published:2013-11-25

摘要/Abstract

摘要：

油桐是我国重要的木本油料植物, 过去对油桐的研究主要集中于栽培和常规育种, 与油桐种仁油脂合成相关的分子机理研究还未见报道。文章采用RNA-seq技术对油桐种子油脂合成的3个不同时期的转录组进行比较, 获得了大量差异表达的Unigene序列。在此基础上, 通过GO分类和Pathway富集性分析将这些差异表达Unigene归类于128个代谢途径, 其中包含与油脂合成相关的脂肪酸生物合成和甘油磷脂代谢途径。桐酸经脂肪酸生物合成途径合成后通过甘油磷脂代谢途径以桐油的形式贮存。将这两个代谢途径的Unigene序列在KEGG数据库中进行比对, 获得了一些关键酶的同源蛋白质。文章通过对编码这些同源蛋白质的基因在油桐种子油脂合成期的表达模式进行分析, 以期为油桐油脂合成, 尤其是桐酸合成机理的解析提供理论参考, 并为油桐的遗传改良提供潜在的基因资源, 从而提高油桐的单位面积产量。

关键词: 油桐(Verniciafordii), 油脂合成途径, RNA-seq, 转录组, 差异表达基因

Abstract:

Tung oil tree (Vernicia fordii) is one of the important woody oil plants in China. Past researches on tung oil tree mainly focu on the cultivation and conventional breeding while the molecular mechanisms related to tung oil synthesis are still uncovered. We compared transcriptome of tung oil tree’s seeds at three different oil synthesis stages using RNA-seq technology and then obtained a lot of differentially expressed Unigenes. Through GO classification and pathway enrichment analysis, all of these differentially expressed Unigenes were classified into 128 metabolism pathways including fatty acid biosynthesis and glycerophospholipid metabolism which are involved in oil synthesis. Some homologous proteins of key enzymes were obtained when the sequences of the Unigenes within these two pathways were aligned against KEGG data-base. Through analysis of expression profiles of these key enzyme genes during seed’s oil synthesis stage, this research not only shed light on elucidation of plant oil synthesis but also provides candidate genes for genetic improvement of tung oil tree thereby increasing the yield per unit area of tung oil tree.

Key words: Tung oil tree, oil synthesis pathway, RNA-seq, transcriptome, differentially expressed genes

陈昊蒋桂雄龙洪旭谭晓风. 基于油桐种子3个不同发育时期转录组的油脂合成代谢途径分析[J]. 遗传, 2013, 35(12): 1403-1414.

CHEN Hao, JIANG Gui-Xiong, LONG Hong-Xu, TAN Xiao-Feng. Analysis of oil synthesis metabolism pathways based on transcrip-tomechanges in tung oil tree’s seeds during three different develop-ment stages[J]. HEREDITAS, 2013, 35(12): 1403-1414.

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基于油桐种子3个不同发育时期转录组的油脂合成代谢途径分析

Analysis of oil synthesis metabolism pathways based on transcrip-tomechanges in tung oil tree’s seeds during three different develop-ment stages

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